OFLC_0000294401 (Onchocerca flexuosa)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) OFLC_0000294401 T174953_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.848 0.848
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.803 0.803
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.803 0.803
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.803 0.803
EBF2
M10466_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_02 		0.803 0.803
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.803 0.803
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.803 0.803
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.803 0.803
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.803 0.803
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OFLC_0000294401-mRNA-1 EBF1 10 75

Links

Other EBF1 family TFs
Other Onchocerca flexuosa TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPRG_05304 Saprolegnia parasitica SPRG_05304 N 0.000
ALNC14_025770 Albugo laibachii ALNC14_025770 N 0.000
F443_05401 Phytophthora parasitica F443_05401 N 0.000
fgenesh_scip_prom.28083.225 Phytophthora lateralis fgenesh_scip_prom.28083.225 N 0.000
fgenesh_scip_prom.46568.1753 Phytophthora kernoviae fgenesh_scip_prom.46568.1753 N 0.000
HpaG806488 Hyaloperonospora arabidopsidis HpaG806488 N 0.000
maker-pag1_scaffold_208-fgenesh-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_208-fgenesh-gene-0.7 N 0.000
maker-pir_contig_78-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_78-fgenesh-gene-0.0 N 0.000
maker-pve_contig_1-fgenesh-gene-1.10 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.10 N 0.000
maker-pve_contig_1-fgenesh-gene-1.21 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.21 N 0.000
Phyra73033 Phytophthora ramorum Phyra73033 N 0.000
PITG_16117 Phytophthora infestans PITG_16117 N 0.000
PYU1_G009481 Pythium ultimum PYU1_G009481 N 0.000
estExt_fgenesh1_kg.C_12090001 Phytophthora capsici estExt_fgenesh1_kg.C_12090001 N 0.000
estExt_fgenesh1_kg.C_40116 Phytophthora capsici estExt_fgenesh1_kg.C_40116 N 0.000