MDP0000490180 (Malus domestica)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 MDP0000490180 T175380_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.830 0.830
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.830 0.830
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.814 0.814
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.725 0.725
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.717 0.717
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.700 0.700
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.700 0.700
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.700 0.700
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000490180 EIN3 37 284

Links

Other EIN3 family TFs
Other Malus domestica TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EIL3 Arabidopsis thaliana AT1G73730 D 0.833
EIL1 Arabidopsis thaliana AT2G27050 D 0.700
EIN3 Arabidopsis thaliana AT3G20770 D 0.703
OS09G0490200 Oryza sativa OS09G0490200 D 0.804
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.717
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.728
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.719
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.808
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.726
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.709
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.804
Bo6g087550 Brassica oleracea Bo6g087550 I 0.824
Bo6g118030 Brassica oleracea Bo6g118030 I 0.833
Bra000528 Brassica rapa Bra000528 I 0.702
Bra003831 Brassica rapa Bra003831 I 0.740
Bra008110 Brassica rapa Bra008110 I 0.823
Bra015970 Brassica rapa Bra015970 I 0.823
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.709
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.700
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.759
F775_17920 Aegilops tauschii F775_17920 I 0.777
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.707
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.709
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.703
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.713
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.704
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.911
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.711
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.927
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.711
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.753
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.709
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.705
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.704
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.798
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.704
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.702
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.773
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.785
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.717
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.739
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.775
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.715
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.763
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.923
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.707
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.700
OB08G26880 Oryza brachyantha OB08G26880 I 0.715
OB09G21280 Oryza brachyantha OB09G21280 I 0.779
OBART08G19960 Oryza barthii OBART08G19960 I 0.723
OBART09G14750 Oryza barthii OBART09G14750 I 0.818
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.709
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.727
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.818
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.703
OLONG_020705 Oryza longistaminata OLONG_020705 I 0.700
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.709
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.758
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.723
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.804
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.709
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.818
ONIVA08G22530 Oryza nivara ONIVA08G22530 I 0.723
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.709
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.723
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.810
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.709
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.818
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.709
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I 0.723
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.804
OS03G0324200 Oryza sativa OS03G0324200 I 0.709
OS03G0324300 Oryza sativa OS03G0324300 I 0.709
OS08G0508700 Oryza sativa OS08G0508700 I 0.723
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.720
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.703
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.818
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.703
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.883
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.931
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.780
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.915
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.931
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.703
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.709
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.755
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.715
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.837
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.730
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.730
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.794
Si013426m.g Setaria italica Si013426m.g I 0.737
Si029259m.g Setaria italica Si029259m.g I 0.781
Si034616m.g Setaria italica Si034616m.g I 0.713
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.822
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.703
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.879
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.703
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.720
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.707
TCM_040510 Theobroma cacao TCM_040510 I 0.911
TCM_042022 Theobroma cacao TCM_042022 I 0.720
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.734
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.701
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.773
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.777
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.829
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.713
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.715
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.715
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.713
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.907
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.711
Ca_02669 Cicer arietinum Ca_02669 I 0.927
Cla006390 Citrullus lanatus Cla006390 I 0.836
Pm028171 Prunus mume Pm028171 I 0.916
29708.m000185 Ricinus communis 29708.m000185 I 0.704
30169.m006395 Ricinus communis 30169.m006395 I 0.915
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.899
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.858
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.720
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.711
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.931
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.711
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.729
mgf020935m Mimulus guttatus mgf020935m I 0.874
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.858
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.711
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.703
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.822
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.833
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.703
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.702
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.703
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.833
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.702
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.707
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.711
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.707
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.943
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.895
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.704
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.724
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.713
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.703
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.939
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.711
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.700
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.874
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.715
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.870
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.795
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.899
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.883
MDP0000202831 Malus domestica MDP0000202831 I 0.711
MDP0000212881 Malus domestica MDP0000212881 I 0.703
MDP0000562585 Malus domestica MDP0000562585 I 0.972
MDP0000564884 Malus domestica MDP0000564884 I 0.703
MDP0000565880 Malus domestica MDP0000565880 I 0.972
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.707
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.711
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.943
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.707
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I 0.719
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.729
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.709
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.725
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.759
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.769
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.915
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.711
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.931
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.704
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.837
PK13351.1 Cannabis sativa PK13351.1 I 0.711
PK19114.1 Cannabis sativa PK19114.1 I 0.939
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.713
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.915
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.786