orange1.1g007017m.g (Citrus sinensis)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 orange1.1g007017m.g T175385_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.927 0.927
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.923 0.923
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.923 0.923
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.923 0.923
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.894 0.894
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.854 0.854
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.703 0.703
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g007017m EIN3 49 296
orange1.1g007028m EIN3 49 296
orange1.1g007034m EIN3 49 296
orange1.1g007983m EIN3 49 296
orange1.1g007988m EIN3 49 296
orange1.1g008002m EIN3 49 296
orange1.1g012340m EIN3 49 296

Links

Other EIN3 family TFs
Other Citrus sinensis TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EIL3 Arabidopsis thaliana AT1G73730 D 0.703
EIL1 Arabidopsis thaliana AT2G27050 D 0.891
EIN3 Arabidopsis thaliana AT3G20770 D 0.923
OS09G0490200 Oryza sativa OS09G0490200 D
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.923
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.854
AC234203.1_FG011 Zea mays AC234203.1_FG011 I
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.722
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.866
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.809
BGIOSGA029545 Oryza indica BGIOSGA029545 I
Bo3g041690 Brassica oleracea Bo3g041690 I 0.871
Bo5g106280 Brassica oleracea Bo5g106280 I 0.903
Bo6g087550 Brassica oleracea Bo6g087550 I 0.705
Bo6g118030 Brassica oleracea Bo6g118030 I 0.707
Bra000528 Brassica rapa Bra000528 I 0.879
Bra003831 Brassica rapa Bra003831 I
Bra008110 Brassica rapa Bra008110 I
Bra015970 Brassica rapa Bra015970 I 0.702
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.821
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I
F775_17920 Aegilops tauschii F775_17920 I
F775_28545 Aegilops tauschii F775_28545 I 0.809
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.919
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.898
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.915
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.935
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.939
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.729
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.927
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.721
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.935
GRMZM2G006752 Zea mays GRMZM2G006752 I
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.797
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.793
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.833
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.810
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.829
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.831
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.829
LPERR08G16890 Leersia perrieri LPERR08G16890 I
LPERR09G10870 Leersia perrieri LPERR09G10870 I
MLOC_10315 Hordeum vulgare MLOC_10315 I
MLOC_10823 Hordeum vulgare MLOC_10823 I
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.809
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.728
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.911
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.927
OB08G26880 Oryza brachyantha OB08G26880 I
OB09G21280 Oryza brachyantha OB09G21280 I
OBART08G19960 Oryza barthii OBART08G19960 I
OBART09G14750 Oryza barthii OBART09G14750 I
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.809
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.743
OLONG_020705 Oryza longistaminata OLONG_020705 I
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.809
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
OMERI08G16770 Oryza meridionalis OMERI08G16770 I
OMERI09G11470 Oryza meridionalis OMERI09G11470 I
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.809
ONIVA08G17420 Oryza nivara ONIVA08G17420 I
ONIVA08G22530 Oryza nivara ONIVA08G22530 I
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.809
OPUNC08G18080 Oryza punctata OPUNC08G18080 I
OPUNC09G13210 Oryza punctata OPUNC09G13210 I
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.809
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.809
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I
OS03G0324200 Oryza sativa OS03G0324200 I 0.809
OS03G0324300 Oryza sativa OS03G0324300 I 0.809
OS08G0508700 Oryza sativa OS08G0508700 I
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.886
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.906
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.931
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.874
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.721
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.721
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.707
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.951
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.878
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.943
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.874
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.711
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.882
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.801
Sb02g028390 Sorghum bicolor Sb02g028390 I
Sb07g027790 Sorghum bicolor Sb07g027790 I
EIL3 Arabidopsis lyrata scaffold_202309.1 I
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.793
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.793
Si013426m.g Setaria italica Si013426m.g I
Si029259m.g Setaria italica Si029259m.g I
Si034616m.g Setaria italica Si034616m.g I 0.793
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.931
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.720
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.870
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.915
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.886
TCM_040510 Theobroma cacao TCM_040510 I 0.703
TCM_042022 Theobroma cacao TCM_042022 I 0.947
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.809
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.852
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.821
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.718
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I
TRIUR3_28079 Triticum urartu TRIUR3_28079 I
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.711
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.878
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.906
Ca_02669 Cicer arietinum Ca_02669 I 0.700
Ca_07534 Cicer arietinum Ca_07534 I 0.906
Ca_10236 Cicer arietinum Ca_10236 I 0.927
Cla006390 Citrullus lanatus Cla006390 I
Pm017009 Prunus mume Pm017009 I 0.906
Pm028171 Prunus mume Pm028171 I 0.707
29708.m000185 Ricinus communis 29708.m000185 I 0.955
30169.m006395 Ricinus communis 30169.m006395 I 0.720
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.704
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.963
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.931
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.703
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.882
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.846
mgf012394m Mimulus guttatus mgf012394m I 0.817
mgf020935m Mimulus guttatus mgf020935m I
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.894
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.919
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.886
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.707
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.707
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.919
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.891
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.919
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.707
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.891
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.878
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.898
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 1.000
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.709
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.709
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.882
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.955
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.947
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.874
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.704
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.911
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.927
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.935
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.704
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.947
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.927
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.700
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.711
MDP0000202831 Malus domestica MDP0000202831 I 0.894
MDP0000212881 Malus domestica MDP0000212881 I 0.890
MDP0000306498 Malus domestica MDP0000306498 I 0.886
MDP0000490180 Malus domestica MDP0000490180 I 0.707
MDP0000562585 Malus domestica MDP0000562585 I 0.707
MDP0000564884 Malus domestica MDP0000564884 I 0.890
MDP0000565880 Malus domestica MDP0000565880 I 0.707
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.898
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.709
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.878
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.801
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.809
Pavir.J02229 Panicum virgatum Pavir.J02229 I
Pavir.J14329 Panicum virgatum Pavir.J14329 I
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.704
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.878
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.882
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.943
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.711
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.911
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.707
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.923
PK01239.1 Cannabis sativa PK01239.1 I 0.890
PK13351.1 Cannabis sativa PK13351.1 I 0.890
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.927
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.717
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.798
PDK_20s1367591g002 Phoenix dactylifera PDK_20s1367591g002 N