CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0009s16010
(
Populus trichocarpa
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
POPTR_0009s16010
T180097_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0009s16010.1
FAR1
61
136
TFYDEYARRLGFSTKVAHFTRPKTDGAIAAREFVCGREGLKRRSADSCHAMLRIELKRGKWVVTHFVKEHNHSTVN
Links
Other
FAR1
family TFs
Other
Populus trichocarpa
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0004s20710
Populus trichocarpa
POPTR_0004s20710
N
0.921
PRUPE_ppa001395mg
Prunus persica
PRUPE_ppa001395mg
N
0.737
TCM_042009
Theobroma cacao
TCM_042009
N
0.737
Pm022953
Prunus mume
Pm022953
N
0.740
cassava42755.valid.m1
Manihot esculenta
cassava42755.valid.m1
N
0.803
Cucsa.142680
Cucumis sativus
Cucsa.142680
N
0.750
Ciclev10018084m.g
Citrus clementina
Ciclev10018084m.g
N
0.724
MDP0000138209
Malus domestica
MDP0000138209
N
0.727
MDP0000150696
Malus domestica
MDP0000150696
N
0.750
MDP0000537221
Malus domestica
MDP0000537221
N
0.727
orange1.1g043648m.g
Citrus sinensis
orange1.1g043648m.g
N
0.724
SapurV1A.0561s0070
Salix purpurea
SapurV1A.0561s0070
N
0.947
SapurV1A.3870s0010
Salix purpurea
SapurV1A.3870s0010
N
0.947