CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_7DS_6354FF359
(
Triticum aestivum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Traes_7DS_6354FF359
T180745_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_7DS_6354FF359.1
FAR1
25
60
EFYNEYALEKGFSVRKSYVEWDGSNKYIILRKIVCS
Links
Other
FAR1
family TFs
Other
Triticum aestivum
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOC_Os05g36160
Oryza sativa
LOC_Os05g36160
D
0.000
29955.m001177
Ricinus communis
29955.m001177
I
0.000
ORGLA05G0154900
Oryza glaberrima
ORGLA05G0154900
I
0.000
ORUFI05G19090
Oryza rufipogon
ORUFI05G19090
I
0.000
OS05G0437700
Oryza sativa
OS05G0437700
I
0.000
POPTR_0002s06800
Populus trichocarpa
POPTR_0002s06800
I
0.000
POPTR_0005s21500
Populus trichocarpa
POPTR_0005s21500
I
0.000
Sb03g040970
Sorghum bicolor
Sb03g040970
I
0.000
Si003247m.g
Setaria italica
Si003247m.g
I
0.000
Solyc04g071510.2
Solanum lycopersicum
Solyc04g071510.2
I
0.000
TRAES3BF019000220CFD_g
Triticum aestivum
TRAES3BF019000220CFD_g
I
0.000
VIT_12s0055g00420
Vitis vinifera
VIT_12s0055g00420
I
0.000
Pm022545
Prunus mume
Pm022545
I
0.000
AMTR_s00040p00057740
Amborella trichopoda
AMTR_s00040p00057740
I
0.000
cassava12750.valid.m1
Manihot esculenta
cassava12750.valid.m1
I
0.000
Cucsa.363740
Cucumis sativus
Cucsa.363740
I
0.000
mgf015540m
Mimulus guttatus
mgf015540m
I
0.000
Aquca_023_00151
Aquilegia coerulea
Aquca_023_00151
I
0.000
Ciclev10002059m.g
Citrus clementina
Ciclev10002059m.g
I
0.000
orange1.1g025985m.g
Citrus sinensis
orange1.1g025985m.g
I
0.000
Pavir.Ea03718
Panicum virgatum
Pavir.Ea03718
I
0.000
Pavir.J05659
Panicum virgatum
Pavir.J05659
I
0.000
SapurV1A.0134s0060
Salix purpurea
SapurV1A.0134s0060
I
0.000
SapurV1A.0625s0150
Salix purpurea
SapurV1A.0625s0150
I
0.000
SapurV1A.5129s0010
Salix purpurea
SapurV1A.5129s0010
I
0.000
ONIVA05G18780
Oryza nivara
ONIVA05G18780
I
0.000
BGIOSGA019930
Oryza indica
BGIOSGA019930
I
0.000
BRADI2G56096
Brachypodium distachyon
BRADI2G56096
I
0.000
GRMZM5G858197
Zea mays
GRMZM5G858197
I
0.000
GSMUA_Achr3G22470_001
Musa acuminata
GSMUA_Achr3G22470_001
I
0.000
LPERR05G14180
Leersia perrieri
LPERR05G14180
I
0.000
MLOC_64571
Hordeum vulgare
MLOC_64571
I
0.000
MTR_4g094390
Medicago truncatula
MTR_4g094390
I
0.000
OB05G25740
Oryza brachyantha
OB05G25740
I
0.000
OBART05G17920
Oryza barthii
OBART05G17920
I
0.000
OGLUM05G18920
Oryza glumaepatula
OGLUM05G18920
I
0.000
OMERI05G15500
Oryza meridionalis
OMERI05G15500
I
0.000
OPUNC05G15820
Oryza punctata
OPUNC05G15820
I
0.000
GBF4
Arabidopsis thaliana
AT1G03970
N
0.000
Bra015281
Brassica rapa
Bra015281
N
0.000
evm.TU.supercontig_21.207
Carica papaya
evm.TU.supercontig_21.207
N
0.000
gene08154-v1.0-hybrid
Fragaria vesca
gene08154-v1.0-hybrid
N
0.000
Gorai.005G078500
Gossypium raimondii
Gorai.005G078500
N
0.000
Lus10028575.g
Linum usitatissimum
Lus10028575.g
N
0.000
MDP0000208334
Malus domestica
MDP0000208334
N
0.000
Bo7g067030
Brassica oleracea
Bo7g067030
N
0.000
Bo5g004230
Brassica oleracea
Bo5g004230
N
0.000
AT5G44080
Arabidopsis thaliana
AT5G44080
N
0.000
Cagra.1671s0014
Capsella grandiflora
Cagra.1671s0014
N
0.000
Al_scaffold_0007_1421
Arabidopsis lyrata
Al_scaffold_0007_1421
N
0.000
Thhalv10003246m.g
Eutrema salsugineum
Thhalv10003246m.g
N
0.000
Thhalv10009710m.g
Eutrema salsugineum
Thhalv10009710m.g
N
0.000
PK16522.1
Cannabis sativa
PK16522.1
N
0.000
PK22350.1
Cannabis sativa
PK22350.1
N
0.000
chr5.CM0052.120.nc
Lotus japonicus
chr5.CM0052.120.nc
N
0.000
fgenesh2_kg.8__404__AT5G44080.1
Arabidopsis lyrata
fgenesh2_kg.8__404__AT5G44080.1
N
0.000
MTR_1g098590
Medicago truncatula
MTR_1g098590
N
0.000
TCM_035623
Theobroma cacao
TCM_035623
N
0.000
VIT_18s0072g00470
Vitis vinifera
VIT_18s0072g00470
N
0.000
Ca_04375
Cicer arietinum
Ca_04375
N
0.000
Cla014026
Citrullus lanatus
Cla014026
N
0.000
29863.m001047
Ricinus communis
29863.m001047
N
0.000
GLYMA10G36820
Glycine max
GLYMA10G36820
N
0.000
GLYMA08G08220
Glycine max
GLYMA08G08220
N
0.000
Carubv10027647m.g
Capsella rubella
Carubv10027647m.g
N
0.000
mgf008848m
Mimulus guttatus
mgf008848m
N
0.000
fgenesh2_kg.1__328__AT1G03970.1
Arabidopsis lyrata
fgenesh2_kg.1__328__AT1G03970.1
N
0.000
Bostr.26675s0358
Boechera stricta
Bostr.26675s0358
N
0.000
Bostr.3148s0051
Boechera stricta
Bostr.3148s0051
N
0.000
Cagra.12696s0002
Capsella grandiflora
Cagra.12696s0002
N
0.000
scaffold_105455.1
Arabidopsis lyrata
scaffold_105455.1
N
0.000
Carubv10011573m.g
Capsella rubella
Carubv10011573m.g
N
0.000