CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Eb02083
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Eb02083
T181721_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb02083.1.p
FAR1
110
190
DFFNLYSWEIGFGTRYGRSNKNNKGYTTRQDIVCSCEGSPRTKNCASIRTRCKVMIRLLRTSDHGWYISRVSTSHNHKLSE
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_73358
Bipolaris maydis
COCC4DRAFT_73358
N
COCCADRAFT_31661
Bipolaris zeicola
COCCADRAFT_31661
N
COCMIDRAFT_22708
Bipolaris oryzae
COCMIDRAFT_22708
N
COCSADRAFT_167842
Bipolaris sorokiniana
COCSADRAFT_167842
N
COCVIDRAFT_33378
Bipolaris victoriae
COCVIDRAFT_33378
N
LEMA_P094790.1
Leptosphaeria maculans
LEMA_P094790.1
N
MPH_12209
Macrophomina phaseolina
MPH_12209
N
PTRG_03180
Pyrenophora triticirepentis
PTRG_03180
N
PTT_11463
Pyrenophora teres
PTT_11463
N
PV09_08081
Verruconis gallopava
PV09_08081
N
SETTUDRAFT_45865
Setosphaeria turcica
SETTUDRAFT_45865
N
estExt_fgenesh1_pm.C_100134
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_100134
N
AB02466.1
Alternaria brassicicola
AB02466.1
N