Pavir.Ga01170 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Ga01170 T181739_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga01170.1.p FAR1 1 86

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1DL_DD0FCDF93 Triticum aestivum Traes_1DL_DD0FCDF93 N 0.711
Pavir.J32630 Panicum virgatum Pavir.J32630 N 0.795
Pavir.J07161 Panicum virgatum Pavir.J07161 N 0.783
Pavir.J05000 Panicum virgatum Pavir.J05000 N 0.940
Pavir.Ia02192 Panicum virgatum Pavir.Ia02192 N 0.759
Pavir.Ea01242 Panicum virgatum Pavir.Ea01242 N 0.856
Pavir.Db01105 Panicum virgatum Pavir.Db01105 N 0.819
Traes_7DL_B8D140CC3 Triticum aestivum Traes_7DL_B8D140CC3 N 0.711
Traes_5DS_E9D675FAC Triticum aestivum Traes_5DS_E9D675FAC N 0.735
Traes_5DL_FC7D15A05 Triticum aestivum Traes_5DL_FC7D15A05 N 0.771
Traes_4AL_9A089DC10 Triticum aestivum Traes_4AL_9A089DC10 N 0.711
BRADI2G04710 Brachypodium distachyon BRADI2G04710 N 0.711
Sb05g007130 Sorghum bicolor Sb05g007130 N 0.747
Sb03g047180 Sorghum bicolor Sb03g047180 N 0.795
Sb03g011600 Sorghum bicolor Sb03g011600 N 0.747
Sb02g028930 Sorghum bicolor Sb02g028930 N 0.759
Sb02g027384 Sorghum bicolor Sb02g027384 N 0.733
Sb02g007217 Sorghum bicolor Sb02g007217 N 0.795
Sb02g005860 Sorghum bicolor Sb02g005860 N 0.747
Sb01g017605 Sorghum bicolor Sb01g017605 N 0.735
Sb01g016055 Sorghum bicolor Sb01g016055 N 0.747
BRADI2G37795 Brachypodium distachyon BRADI2G37795 N 0.735