CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J19504
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.J19504
T181834_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J19504.1.p
FAR1
157
237
EFYNLYSWEIGFGIRYGRSNKNRNGYTTRQDIVCSCEGFDRQSNAASVRTGCKAMIRLLRTSDHGWYVSRICDVHNHKLSE
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb07g020405
Sorghum bicolor
Sb07g020405
N
0.728
Traes_2AL_B21EABE42
Triticum aestivum
Traes_2AL_B21EABE42
N
0.714
Pavir.Eb02083
Panicum virgatum
Pavir.Eb02083
N
0.778
Pavir.J09368
Panicum virgatum
Pavir.J09368
N
0.704
Pavir.J10053
Panicum virgatum
Pavir.J10053
N
0.802
Pavir.J15395
Panicum virgatum
Pavir.J15395
N
0.716
Pavir.J21625
Panicum virgatum
Pavir.J21625
N
0.926
Pavir.J30827
Panicum virgatum
Pavir.J30827
N
0.718
Pavir.J32900
Panicum virgatum
Pavir.J32900
N
0.778