CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000012748
(
Gadus morhua
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSGMOG00000012748
T185955_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxo6
M00798_2.00
Mus musculus
NNNNHHRYDN
NHRYDDNNNN
PBM
Weirauch et al.(2013)
pTH3477
0.807
0.867
FOXO6
M03049_2.00
Homo sapiens
GTAAACATGTTTAC
GTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO6_1
0.807
0.867
FOXO6
M03050_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXO6_2
0.807
0.867
FOXO6
M03051_2.00
Homo sapiens
TTTCCCCACACGMC
GKCGTGTGGGGAAA
SELEX
Jolma et al.(2013)
FOXO6_3
0.807
0.867
Foxo3
M00797_2.00
Mus musculus
RTMAACAN
NTGTTKAY
PBM
Weirauch et al.(2013)
pTH3749
0.804
0.855
FOXO3
M03019_2.00
Homo sapiens
GTAAACATGTTTAC
GTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO3_1
0.804
0.855
FOXO3
M03020_2.00
Homo sapiens
GTAAACAW
WTGTTTAC
SELEX
Jolma et al.(2013)
FOXO3_2
0.804
0.855
FOXO3
M03021_2.00
Homo sapiens
KTTCCCCACAC
GTGTGGGGAAM
SELEX
Jolma et al.(2013)
FOXO3_3
0.804
0.855
FOXO3
M04813_2.00
Homo sapiens
HHCCCCACACN
NGTGTGGGGDD
SELEX
Yin et al.(2017)
FOXO3_eDBD_HT-SELEX
0.804
0.855
FOXO3
M09087_2.00
Homo sapiens
DGTAAACAVV
BBTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXO3_HUMAN.H11MO.0.B
0.804
0.855
Foxo3
M09110_2.00
Mus musculus
DGTAAACAVV
BBTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXO3_MOUSE.H11MO.0.B
0.804
0.855
FOXO3
M10537_2.00
Homo sapiens
WAHGTAAACAAVND
HNBTTGTTTACDWW
Transfac
Matys et al.(2006)
V$FOXO3_01
0.804
0.855
FOXO3
M10538_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO3A_Q1
0.804
0.855
FOXO3
M10539_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO3A_Q3
0.804
0.855
FOXO3
M04814_2.00
Homo sapiens
NHCCCCACACV
BGTGTGGGGDN
SELEX
Yin et al.(2017)
FOXO3_eDBD_Methyl-HT-SELEX
0.804
0.855
Foxo1
M00795_2.00
Mus musculus
NRWMAACAN
NTGTTKWYN
PBM
Weirauch et al.(2013)
pTH3846
0.797
0.867
FOXO1
M03022_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
FOXO1_1
0.797
0.867
FOXO1
M03023_2.00
Homo sapiens
GTAAACATGTTTAY
RTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO1_2
0.797
0.867
FOXO1
M03024_2.00
Homo sapiens
TTTCCCCACACD
HGTGTGGGGAAA
SELEX
Jolma et al.(2013)
FOXO1_3
0.797
0.867
Foxo1
M08122_2.00
Mus musculus
DGTAAACARSH
DSYTGTTTACH
ChIP-seq
Mathelier et al.(2014)
MA0480.1
0.797
0.867
FOXO1
M09091_2.00
Homo sapiens
NRDAAACAVVVN
NBBBTGTTTHYN
Misc
Kulakovskiy et al.(2013)
FOXO1_HUMAN.H11MO.0.A
0.797
0.867
Foxo1
M09108_2.00
Mus musculus
RWMAACAVVN
NBBTGTTKWY
Misc
Kulakovskiy et al.(2013)
FOXO1_MOUSE.H11MO.0.A
0.797
0.867
Foxo1
M09547_2.00
Mus musculus
GTAAACAV
BTGTTTAC
Misc
Heinz et al.(2010)
RAW-Foxo1_Fan_et_al.
0.797
0.867
FOXO1
M10549_2.00
Homo sapiens
NVWAAACAMN
NKTGTTTWBN
Transfac
Matys et al.(2006)
V$FOXO1_01
0.797
0.867
FOXO1
M10550_2.00
Homo sapiens
VNHGTAAACAANHH
DDNTTGTTTACDNB
Transfac
Matys et al.(2006)
V$FOXO1_02
0.797
0.867
FOXO1
M10551_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1_03
0.797
0.867
FOXO1
M10552_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1_04
0.797
0.867
FOXO1
M10553_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1A_Q3
0.797
0.867
FOXO1
M10554_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO1A_Q5
0.797
0.867
Foxo4
M00794_2.00
Mus musculus
NNRWMAAYAN
NTRTTKWYNN
PBM
Weirauch et al.(2013)
pTH3731
0.788
0.831
Foxo4
M09107_2.00
Mus musculus
MVWAAACAA
TTGTTTWBK
Misc
Kulakovskiy et al.(2013)
FOXO4_MOUSE.H11MO.0.C
0.788
0.831
daf-16
M01989_2.00
Caenorhabditis elegans
NNRWMAAYAN
NTRTTKWYNN
PBM
Weirauch et al.(2014)
pTH8995
0.780
0.711
foxo
M06198_2.00
Drosophila melanogaster
YVRWAAACA
TGTTTWYBR
B1H
Zhu et al.(2011)
foxo_SANGER_10_FBgn0038197
0.755
0.771
FOXO4
M03039_2.00
Homo sapiens
GTMAACATGTTKAC
GTMAACATGTTKAC
SELEX
Jolma et al.(2013)
FOXO4_1
0.677
0.759
FOXO4
M03040_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXO4_2
0.677
0.759
FOXO4
M03041_2.00
Homo sapiens
WTTCCCCACACR
YGTGTGGGGAAW
SELEX
Jolma et al.(2013)
FOXO4_3
0.677
0.759
FOXO4
M04849_2.00
Homo sapiens
VBGYMMACAN
NTGTKKRCVB
SELEX
Yin et al.(2017)
FOXO4_eDBD_HT-SELEX
0.677
0.759
FOXO4
M09097_2.00
Homo sapiens
MVWAAACAA
TTGTTTWBK
Misc
Kulakovskiy et al.(2013)
FOXO4_HUMAN.H11MO.0.C
0.677
0.759
FOXO4
M10562_2.00
Homo sapiens
VWAAACAHNHH
DDNDTGTTTWB
Transfac
Matys et al.(2006)
V$FOXO4_01
0.677
0.759
FOXO4
M10563_2.00
Homo sapiens
NWNGTAAACAAMNN
NNKTTGTTTACNWN
Transfac
Matys et al.(2006)
V$FOXO4_02
0.677
0.759
FOXO4
M04850_2.00
Homo sapiens
NNGTMMACAN
NTGTKKACNN
SELEX
Yin et al.(2017)
FOXO4_eDBD_Methyl-HT-SELEX
0.677
0.759
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.665
0.446
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.665
0.446
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.665
0.446
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.665
0.446
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.665
0.446
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.665
0.446
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.665
0.446
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.665
0.446
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.665
0.446
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.665
0.446
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000013631
Forkhead
137
225
GNYSYADLITQAIESSPENRLTLSQIYDWMVRSVPYFKDKGDSNSSAGWKNSIRHNLSLHSRFVKVQNEGTGKSSWWMVNPEGGKGGKA
Links
Other
Forkhead
family TFs
Other
Gadus morhua
TFs
316 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NAC002
Arabidopsis thaliana
AT1G01720
D
0.000
AT3G12910
Arabidopsis thaliana
AT3G12910
D
0.000
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.000
Traes_7BL_8A5D12EE1
Triticum aestivum
Traes_7BL_8A5D12EE1
I
0.000
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.000
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.000
mgf015836m
Mimulus guttatus
mgf015836m
I
0.000
mgf002365m
Mimulus guttatus
mgf002365m
I
0.000
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.000
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.000
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.000
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.000
cassava23439.valid.m1
Manihot esculenta
cassava23439.valid.m1
I
0.000
Cla011742
Citrullus lanatus
Cla011742
I
0.000
Ca_13571
Cicer arietinum
Ca_13571
I
0.000
TRIUR3_29260
Triticum urartu
TRIUR3_29260
I
0.000
Traes_7DL_D05DA373C
Triticum aestivum
Traes_7DL_D05DA373C
I
0.000
NAC026
Arabidopsis thaliana
AT1G62700
I
0.000
Cagra.27691s0001
Capsella grandiflora
Cagra.27691s0001
I
0.000
Cagra.5641s0055
Capsella grandiflora
Cagra.5641s0055
I
0.000
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.000
Carubv10014270m.g
Capsella rubella
Carubv10014270m.g
I
0.000
Gorai.009G309000
Gossypium raimondii
Gorai.009G309000
I
0.000
Gorai.010G171100
Gossypium raimondii
Gorai.010G171100
I
0.000
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
0.000
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.000
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.000
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.000
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.000
SapurV1A.0958s0170
Salix purpurea
SapurV1A.0958s0170
I
0.000
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.000
Thhalv10021225m.g
Eutrema salsugineum
Thhalv10021225m.g
I
0.000
Thhalv10023502m.g
Eutrema salsugineum
Thhalv10023502m.g
I
0.000
PK05686.1
Cannabis sativa
PK05686.1
I
0.000
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.000
Bo1g138800
Brassica oleracea
Bo1g138800
I
0.000
Bo3g065200
Brassica oleracea
Bo3g065200
I
0.000
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.000
Bra033239
Brassica rapa
Bra033239
I
0.000
Bra039353
Brassica rapa
Bra039353
I
0.000
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.000
F775_11764
Aegilops tauschii
F775_11764
I
0.000
fgenesh2_kg.3__1353__AT3G12910.1
Arabidopsis lyrata
fgenesh2_kg.3__1353__AT3G12910.1
I
0.000
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.000
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.000
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.000
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.000
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.000
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.000
MLOC_37364
Hordeum vulgare
MLOC_37364
I
0.000
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.000
Si036303m.g
Setaria italica
Si036303m.g
I
0.000
SELMODRAFT_71305
Selaginella moellendorffii
SELMODRAFT_71305
I
0.000
SELMODRAFT_69090
Selaginella moellendorffii
SELMODRAFT_69090
I
0.000
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.000
POPTR_0005s10610
Populus trichocarpa
POPTR_0005s10610
I
0.000
MTR_2g068920
Medicago truncatula
MTR_2g068920
I
0.000
MTR_2g068880
Medicago truncatula
MTR_2g068880
I
0.000
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.000
Cucsa.119310
Cucumis sativus
Cucsa.119310
N
0.000
F775_22671
Aegilops tauschii
F775_22671
N
0.000
F775_22440
Aegilops tauschii
F775_22440
N
0.000
Cla007018
Citrullus lanatus
Cla007018
N
0.000
BRADI3G13630
Brachypodium distachyon
BRADI3G13630
N
0.000
Bra037283
Brassica rapa
Bra037283
N
0.000
TRIUR3_32216
Triticum urartu
TRIUR3_32216
N
0.000
Bo9g024360
Brassica oleracea
Bo9g024360
N
0.000
Traes_4DL_B29067862
Triticum aestivum
Traes_4DL_B29067862
N
0.000
Traes_4DL_7CB8EC5A8
Triticum aestivum
Traes_4DL_7CB8EC5A8
N
0.000