Alligator_sinensis_CCG004258.1 (Alligator sinensis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 Alligator_sinensis_CCG004258.1 T188943_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXM1
M01979_2.00 		Meleagris gallopavo
RDAWRCAH
DTGYWTHY		 PBM
Weirauch et al.(2014)
pTH8652 		0.804 0.976
Foxm1
M01009_2.00 		Mus musculus
NNYDWYNN
NNRWHRNN		 PBM
Nakagawa et al.(2013)
Foxm1 		0.796 0.952
FOXM1
M09085_2.00 		Homo sapiens
NVWRDGYAAAYA
TRTTTRCHYWBN		 Misc
Kulakovskiy et al.(2013)
FOXM1_HUMAN.H11MO.0.A 		0.796 0.952
Foxm1
M09099_2.00 		Mus musculus
NVWRDGYAAAYA
TRTTTRCHYWBN		 Misc
Kulakovskiy et al.(2013)
FOXM1_MOUSE.H11MO.0.B 		0.796 0.952
FOXM1
M10532_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXM1_01 		0.796 0.952
Foxm1
M10568_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXM1_03 		0.796 0.952
Foxm1
M10569_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXM1_04 		0.796 0.952
FOXM1
M10533_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXM1_Q3_02 		0.796 0.952
FOXM1
M10534_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXM1_Q3 		0.796 0.952
FOXM1
M10535_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXM1_Q6 		0.796 0.952
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG004258.1 Forkhead 82 169

Links

Other Forkhead family TFs
Other Alligator sinensis TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPRG_02234 Saprolegnia parasitica SPRG_02234 N
ALNC14_059010 Albugo laibachii ALNC14_059010 N
F443_18208 Phytophthora parasitica F443_18208 N
fgenesh_scip_prom.28083.8498 Phytophthora lateralis fgenesh_scip_prom.28083.8498 N
HpaG808188 Hyaloperonospora arabidopsidis HpaG808188 N
maker-pir_contig_380-snap-gene-0.13 Pythium irregulare maker-pir_contig_380-snap-gene-0.13 N
maker-piw_contig_292-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_292-fgenesh-gene-0.2 N
maker-pve_contig_274-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_274-fgenesh-gene-0.2 N
Phyra76681 Phytophthora ramorum Phyra76681 N
Physo140584 Phytophthora sojae Physo140584 N
PITG_13032 Phytophthora infestans PITG_13032 N
PYU1_G000358 Pythium ultimum PYU1_G000358 N
snap_masked-par_contig_136-abinit-gene-0.22 Pythium arrhenomanes snap_masked-par_contig_136-abinit-gene-0.22 N