CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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22632_Multiple
(
Saccharomyces mikatae
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
22632_Multiple
T189768_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FHL1
M00046_2.00
Saccharomyces cerevisiae
NGACGCAM
KTGCGTCN
PBM
Badis et al.(2008)
FHL1_2086
0.864
1.000
FHL1
M01543_2.00
Saccharomyces cerevisiae
NVDCGCRNN
NNYGCGHBN
PBM
Zhu et al.(2009)
Fhl1
0.864
1.000
FHL1
M07475_2.00
Saccharomyces cerevisiae
GACGCAVN
NBTGCGTC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0295.1
0.864
1.000
FHL1
M08557_2.00
Saccharomyces cerevisiae
NNNDDNGACGCAMWNNNNDN
NHNNNNWKTGCGTCNHHNNN
Misc
DeBoer et al.(2011)
YPR104C_808
0.864
1.000
KLLA0_F08206g
M01015_2.00
Kluyveromyces lactis
NNVRYKCRNN
NNYGMRYBNN
PBM
Nakagawa et al.(2013)
KLLA0F08206p
0.701
0.890
AGOS_AEL327W
M01004_2.00
Ashbya gossypii
NNVRCKCRNN
NNYGMGYBNN
PBM
Nakagawa et al.(2013)
AEL327Wp
0.692
0.902
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
22632_Multiple
Forkhead
460
546
KPTVSYSAMLTTCIRKYSTAKGMSLSEIYAGIRELFPYYKYCPDGWQSSVRHNLSLNKSFRKVSKEGKGWLWGLDEEYIAERERQKK
Links
Other
Forkhead
family TFs
Other
Saccharomyces mikatae
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nOo.2.0.1.g02891
Onchocerca ochengi
nOo.2.0.1.g02891
N
EEL_0000836801
Elaeophora elaphi
EEL_0000836801
N
Hba_15127
Heterorhabditis bacteriophora
Hba_15127
N
HPLM_0000759901
Haemonchus placei
HPLM_0000759901
N
L596_g22127
Steinernema carpocapsae
L596_g22127
N
L889_g13531
Steinernema feltiae
L889_g13531
N
L893_g15812
Steinernema glaseri
L893_g15812
N
L898_g21023
Steinernema monticolum
L898_g21023
N
nAv.1.0.1.g07509
Acanthocheilonema viteae
nAv.1.0.1.g07509
N
nDi.2.2.2.g05204
Dirofilaria immitis
nDi.2.2.2.g05204
N
NECAME_06883
Necator americanus
NECAME_06883
N
DICVIV_09066
Dictyocaulus viviparus
DICVIV_09066
N
PTRK_0000737000
Parastrongyloides trichosuri
PTRK_0000737000
N
RSKR_0000764900
Rhabditophanes kr3021
RSKR_0000764900
N
SPAL_0001306600
Strongyloides papillosus
SPAL_0001306600
N
SSTP_0000060400
Strongyloides stercoralis
SSTP_0000060400
N
SVE_0357400
Strongyloides venezuelensis
SVE_0357400
N
SVUK_0000979701
Strongylus vulgaris
SVUK_0000979701
N
TCLT_0000871401
Thelazia callipaeda
TCLT_0000871401
N
TCNE_0000650001
Toxocara canis
TCNE_0000650001
N
TELCIR_07750
Teladorsagia circumcincta
TELCIR_07750
N
hlh-13
Caenorhabditis elegans
WBGene00001957
N
BGIBMGA000497
Bombyx mori
BGIBMGA000497
N
Bm4202
Brugia malayi
Bm4202
N
CBG14376
Caenorhabditis briggsae
CBG14376
N
CBN25524
Caenorhabditis brenneri
CBN25524
N
CJA18896
Caenorhabditis japonica
CJA18896
N
CRE00836
Caenorhabditis remanei
CRE00836
N
ISCW024442
Ixodes scapularis
ISCW024442
N
LOAG_03370
Loa loa
LOAG_03370
N
tetur28g00880
Tetranychus urticae
tetur28g00880
N
WUBG_02321
Wuchereria bancrofti
WUBG_02321
N
WBGene00242152
Onchocerca volvulus
WBGene00242152
N
ACAC_0001290101
Angiostrongylus cantonensis
ACAC_0001290101
N
ACOC_0000707401
Angiostrongylus costaricensis
ACOC_0000707401
N
ALUE_0000473701
Ascaris lumbricoides
ALUE_0000473701
N
ANCCAN_02799
Ancylostoma caninum
ANCCAN_02799
N
ANCCEY_01975
Ancylostoma ceylanicum
ANCCEY_01975
N
ANCDUO_01990
Ancylostoma duodenale
ANCDUO_01990
N
ASU_14779
Ascaris suum
ASU_14779
N
BTMF_0001098901
Brugia timori
BTMF_0001098901
N