CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf03615-processed-gene-0.0
(
Meloidogyne floridensis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
augustus_masked-nMf.1.1.scaf03615-processed-gene-0.0
T190338_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG14292
M01226_2.00
Caenorhabditis briggsae
VAWAACAW
WTGTTWTB
PBM
Lambert et al.(2019)
pTH11445
0.796
0.791
fkh-9
M00663_2.00
Caenorhabditis elegans
NNVWHAAYAN
NTRTTDWBNN
PBM
Narasimhan et al.(2015)
pTH9957
0.796
0.791
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf03615-processed-gene-0.0-mRNA-1
Forkhead
15
106
RPSLSYKDLIIEAIESNPDRRLKLSEIYQVIKYLHPYYQRRADQWGWQNSIRHNLSLHDCFVKLPLKQTSANGVVGHFWTVVHRNPEDKQGP
Links
Other
Forkhead
family TFs
Other
Meloidogyne floridensis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZBTB42
Homo sapiens
ENSG00000179627
D
ENSPFOG00000010298
Poecilia formosa
ENSPFOG00000010298
I
znf238.2
Xenopus tropicalis
XB-GENE-1219066
I
Pvit_02527
Pogona vitticeps
Pvit_02527
I
Ogr11588
Ophisaurus gracilis
Ogr11588
I
ENSP00000409107
Macaca fascicularis
ENSP00000409107
I
Alligator_sinensis_CCG020881.1
Alligator sinensis
Alligator_sinensis_CCG020881.1
I
ENSXMAG00000018241
Xiphophorus maculatus
ENSXMAG00000018241
I
ENSXMAG00000006703
Xiphophorus maculatus
ENSXMAG00000006703
I
zbtb42
Takifugu rubripes
ENSTRUG00000013592
I
zbtb18
Takifugu rubripes
ENSTRUG00000000952
I
zbtb42
Tetraodon nigroviridis
ENSTNIG00000000917
I
zbtb18
Tetraodon nigroviridis
ENSTNIG00000000430
I
ENSSSCG00000030070
Sus scrofa
ENSSSCG00000030070
I
ENSSHAG00000008534
Sarcophilus harrisii
ENSSHAG00000008534
I
ZBTB42
Pan troglodytes
ENSPTRG00000040287
I
ENSPFOG00000022080
Poecilia formosa
ENSPFOG00000022080
I
ZBTB42
Anolis carolinensis
ENSACAG00000011451
I
zbtb42
Oryzias latipes
ENSORLG00000017008
I
zbtb18
Oryzias latipes
ENSORLG00000004823
I
ENSONIG00000000862
Oreochromis niloticus
ENSONIG00000000862
I
ZBTB42
Monodelphis domestica
ENSMODG00000013701
I
ZBTB42
Meleagris gallopavo
ENSMGAG00000015389
I
ENSLOCG00000012759
Lepisosteus oculatus
ENSLOCG00000012759
I
ZBTB42
Gallus gallus
ENSGALG00000023025
I
zbtb18
Gasterosteus aculeatus
ENSGACG00000010518
I
zbtb42
Gasterosteus aculeatus
ENSGACG00000006297
I
zbtb42
Danio rerio
ENSDARG00000102761
I
ENSCSAG00000019588
Chlorocebus sabaeus
ENSCSAG00000019588
I
ENSAMEG00000007755
Ailuropoda melanoleuca
ENSAMEG00000007755
I
ENSAMXG00000025635
Astyanax mexicanus
ENSAMXG00000025635
N