CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00019p00253580
(
Amborella trichopoda
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
AMTR_s00019p00253580
T191675_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN07459
GATA
260
297
CRHCGTSEKSTPMMRRGPAGPRSLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Amborella trichopoda
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000303048
Malus domestica
MDP0000303048
N
0.810
cassava249.valid.m1
Manihot esculenta
cassava249.valid.m1
N
0.809
Ciclev10002056m.g
Citrus clementina
Ciclev10002056m.g
N
0.837
Eucgr.F02157
Eucalyptus grandis
Eucgr.F02157
N
0.815
evm.TU.supercontig_3189.1
Carica papaya
evm.TU.supercontig_3189.1
N
0.810
gene26537-v1.0-hybrid
Fragaria vesca
gene26537-v1.0-hybrid
N
0.815
Gorai.005G097100
Gossypium raimondii
Gorai.005G097100
N
0.837
Gorai.009G279200
Gossypium raimondii
Gorai.009G279200
N
0.837
Gorai.010G033500
Gossypium raimondii
Gorai.010G033500
N
0.837
cassava1724.valid.m1
Manihot esculenta
cassava1724.valid.m1
N
0.810
orange1.1g022924m.g
Citrus sinensis
orange1.1g022924m.g
N
0.837
SapurV1A.0004s0630
Salix purpurea
SapurV1A.0004s0630
N
0.810
SapurV1A.0320s0100
Salix purpurea
SapurV1A.0320s0100
N
0.810
PK04210.1
Cannabis sativa
PK04210.1
N
0.815
chr1.CM0289.360.nc
Lotus japonicus
chr1.CM0289.360.nc
N
0.815
LjT45A20.70.nd
Lotus japonicus
LjT45A20.70.nd
N
0.814
PDK_20s1363101g001
Phoenix dactylifera
PDK_20s1363101g001
N
0.835
Solyc01g106030.2
Solanum lycopersicum
Solyc01g106030.2
N
0.848
GLYMA06G10280
Glycine max
GLYMA06G10280
N
0.810
GLYMA14G36150
Glycine max
GLYMA14G36150
N
0.810
GSMUA_Achr10G07970_001
Musa acuminata
GSMUA_Achr10G07970_001
N
0.820
MTR_5g066510
Medicago truncatula
MTR_5g066510
N
0.815
PGSC0003DMG400033576
Solanum tuberosum
PGSC0003DMG400033576
N
0.848
POPTR_0002s11150
Populus trichocarpa
POPTR_0002s11150
N
0.810
POPTR_0005s19580
Populus trichocarpa
POPTR_0005s19580
N
0.810
PRUPE_ppa009340mg
Prunus persica
PRUPE_ppa009340mg
N
0.810
GLYMA02G37980
Glycine max
GLYMA02G37980
N
0.815
Solyc10g047640.1
Solanum lycopersicum
Solyc10g047640.1
N
0.852
TCM_034530
Theobroma cacao
TCM_034530
N
0.837
VIT_03s0038g00480
Vitis vinifera
VIT_03s0038g00480
N
0.852
TIFY1
Vitis vinifera
VIT_18s0001g07720
N
0.815
Ca_14968
Cicer arietinum
Ca_14968
N
0.810
Pm004390
Prunus mume
Pm004390
N
0.810
29596.m000720
Ricinus communis
29596.m000720
N
0.815