BRADI3G33200 (Brachypodium distachyon)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 BRADI3G33200 T192011_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.853 0.972
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.853 0.972
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.847 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.843 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.838 0.889
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.833 0.861
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.833 0.861
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.833 0.861
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.832 0.833
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.832 0.833
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.832 0.833
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.830 0.778
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.830 0.778
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.823 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.823 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.823 0.833
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.819 0.778
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.819 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G33200.1 GATA 262 297

Links

Other GATA family TFs
Other Brachypodium distachyon TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCP3 Arabidopsis thaliana AT1G53230 D 0.000
TCP4 Arabidopsis thaliana AT3G15030 D 0.000
OS01G0213800 Oryza sativa OS01G0213800 D 0.000
TCP4 Arabidopsis lyrata scaffold_301743.1 D 0.000
LjT20A21.20.nc Lotus japonicus LjT20A21.20.nc D 0.000
AC205574.3_FG006 Zea mays AC205574.3_FG006 I 0.000
AMTR_s00021p00158020 Amborella trichopoda AMTR_s00021p00158020 I 0.000
AMTR_s00029p00245970 Amborella trichopoda AMTR_s00029p00245970 I 0.000
AMTR_s00133p00053750 Amborella trichopoda AMTR_s00133p00053750 I 0.000
TCP10 Arabidopsis thaliana AT2G31070 I 0.000
PCF5 Oryza indica BGIOSGA002128 I 0.000
Bo1g129830 Brassica oleracea Bo1g129830 I 0.000
Bo3g066540 Brassica oleracea Bo3g066540 I 0.000
Bo5g127500 Brassica oleracea Bo5g127500 I 0.000
Bra021586 Brassica rapa Bra021586 I 0.000
Bra027284 Brassica rapa Bra027284 I 0.000
BRADI2G06890 Brachypodium distachyon BRADI2G06890 I 0.000
BRADI2G20060 Brachypodium distachyon BRADI2G20060 I 0.000
F775_07590 Aegilops tauschii F775_07590 I 0.000
TCP3 Arabidopsis lyrata fgenesh2_kg.1__4401__AT1G53230.1 I 0.000
GLYMA06G43721 Glycine max GLYMA06G43721 I 0.000
GLYMA12G14200 Glycine max GLYMA12G14200 I 0.000
GLYMA12G20160 Glycine max GLYMA12G20160 I 0.000
GLYMA12G33640 Glycine max GLYMA12G33640 I 0.000
GLYMA12G35720 Glycine max GLYMA12G35720 I 0.000
GLYMA13G34690 Glycine max GLYMA13G34690 I 0.000
GLYMA13G36840 Glycine max GLYMA13G36840 I 0.000
GSMUA_Achr10G01020_001 Musa acuminata GSMUA_Achr10G01020_001 I 0.000
GSMUA_Achr10G14340_001 Musa acuminata GSMUA_Achr10G14340_001 I 0.000
GSMUA_Achr3G03540_001 Musa acuminata GSMUA_Achr3G03540_001 I 0.000
GSMUA_Achr3G31370_001 Musa acuminata GSMUA_Achr3G31370_001 I 0.000
GSMUA_Achr5G06660_001 Musa acuminata GSMUA_Achr5G06660_001 I 0.000
GSMUA_Achr6G14430_001 Musa acuminata GSMUA_Achr6G14430_001 I 0.000
GSMUA_Achr7G13980_001 Musa acuminata GSMUA_Achr7G13980_001 I 0.000
GSMUA_Achr8G19990_001 Musa acuminata GSMUA_Achr8G19990_001 I 0.000
MLOC_12004 Hordeum vulgare MLOC_12004 I 0.000
MTR_2g078200 Medicago truncatula MTR_2g078200 I 0.000
MTR_2g090960 Medicago truncatula MTR_2g090960 I 0.000
MTR_4g079580 Medicago truncatula MTR_4g079580 I 0.000
MTR_8g463380 Medicago truncatula MTR_8g463380 I 0.000
OBART01G07230 Oryza barthii OBART01G07230 I 0.000
OBART02G32460 Oryza barthii OBART02G32460 I 0.000
OGLUM01G08160 Oryza glumaepatula OGLUM01G08160 I 0.000
OLONG_003082 Oryza longistaminata OLONG_003082 I 0.000
OMERI01G07200 Oryza meridionalis OMERI01G07200 I 0.000
ONIVA01G09270 Oryza nivara ONIVA01G09270 I 0.000
OPUNC01G06940 Oryza punctata OPUNC01G06940 I 0.000
ORGLA01G0062300 Oryza glaberrima ORGLA01G0062300 I 0.000
ORUFI01G07780 Oryza rufipogon ORUFI01G07780 I 0.000
OS01G0755500 Oryza sativa OS01G0755500 I 0.000
PGSC0003DMG400012396 Solanum tuberosum PGSC0003DMG400012396 I 0.000
XM_002300382.1 Populus trichocarpa POPTR_0001s38480 I 0.000
POPTR_0011s09890 Populus trichocarpa POPTR_0011s09890 I 0.000
POPTR_0019s12110 Populus trichocarpa POPTR_0019s12110 I 0.000
PRUPE_ppa007094mg Prunus persica PRUPE_ppa007094mg I 0.000
Sb03g035350 Sorghum bicolor Sb03g035350 I 0.000
TCP10 Arabidopsis lyrata scaffold_401627.1 I 0.000
SELMODRAFT_104521 Selaginella moellendorffii SELMODRAFT_104521 I 0.000
SELMODRAFT_28794 Selaginella moellendorffii SELMODRAFT_28794 I 0.000
SELMODRAFT_29160 Selaginella moellendorffii SELMODRAFT_29160 I 0.000
SELMODRAFT_29162 Selaginella moellendorffii SELMODRAFT_29162 I 0.000
SELMODRAFT_7330 Selaginella moellendorffii SELMODRAFT_7330 I 0.000
SELMODRAFT_89227 Selaginella moellendorffii SELMODRAFT_89227 I 0.000
Si002496m.g Setaria italica Si002496m.g I 0.000
Si004564m.g Setaria italica Si004564m.g I 0.000
Solyc07g053410.2 Solanum lycopersicum Solyc07g053410.2 I 0.000
Solyc07g062680.1 Solanum lycopersicum Solyc07g062680.1 I 0.000
TCM_031706 Theobroma cacao TCM_031706 I 0.000
VIT_10s0003g00870 Vitis vinifera VIT_10s0003g00870 I 0.000
TCP10 Vitis vinifera VIT_12s0028g02520 I 0.000
VIT_19s0014g01680 Vitis vinifera VIT_19s0014g01680 I 0.000
Ca_02473 Cicer arietinum Ca_02473 I 0.000
Ca_11295 Cicer arietinum Ca_11295 I 0.000
Ca_12866 Cicer arietinum Ca_12866 I 0.000
Ca_16227 Cicer arietinum Ca_16227 I 0.000
Cla002460 Citrullus lanatus Cla002460 I 0.000
Cla013734 Citrullus lanatus Cla013734 I 0.000
Cla016530 Citrullus lanatus Cla016530 I 0.000
Cla023702 Citrullus lanatus Cla023702 I 0.000
Pm029788 Prunus mume Pm029788 I 0.000
29646.m001100 Ricinus communis 29646.m001100 I 0.000
30192.m000545 Ricinus communis 30192.m000545 I 0.000
cassava19177.valid.m1 Manihot esculenta cassava19177.valid.m1 I 0.000
cassava35669.valid.m1 Manihot esculenta cassava35669.valid.m1 I 0.000
cassava35945.valid.m1 Manihot esculenta cassava35945.valid.m1 I 0.000
Cucsa.122730 Cucumis sativus Cucsa.122730 I 0.000
Cucsa.273460 Cucumis sativus Cucsa.273460 I 0.000
e_gw1.207.98.1 Physcomitrella patens e_gw1.207.98.1 I 0.000
mgf002386m Mimulus guttatus mgf002386m I 0.000
mgf021685m Mimulus guttatus mgf021685m I 0.000
Aquca_005_00099 Aquilegia coerulea Aquca_005_00099 I 0.000
Aquca_057_00119 Aquilegia coerulea Aquca_057_00119 I 0.000
Bostr.0124s0115 Boechera stricta Bostr.0124s0115 I 0.000
Bostr.24513s0122 Boechera stricta Bostr.24513s0122 I 0.000
Bostr.28625s0206 Boechera stricta Bostr.28625s0206 I 0.000
Cagra.0007s0045 Capsella grandiflora Cagra.0007s0045 I 0.000
Cagra.1472s0007 Capsella grandiflora Cagra.1472s0007 I 0.000
Carubv10009348m.g Capsella rubella Carubv10009348m.g I 0.000
Carubv10013851m.g Capsella rubella Carubv10013851m.g I 0.000
Ciclev10008390m.g Citrus clementina Ciclev10008390m.g I 0.000
Ciclev10015871m.g Citrus clementina Ciclev10015871m.g I 0.000
Eucgr.F01204 Eucalyptus grandis Eucgr.F01204 I 0.000
Eucgr.K01089 Eucalyptus grandis Eucgr.K01089 I 0.000
evm.TU.supercontig_131.71 Carica papaya evm.TU.supercontig_131.71 I 0.000
gene17805-v1.0-hybrid Fragaria vesca gene17805-v1.0-hybrid I 0.000
Gorai.002G064500 Gossypium raimondii Gorai.002G064500 I 0.000
Gorai.009G373000 Gossypium raimondii Gorai.009G373000 I 0.000
Gorai.013G172800 Gossypium raimondii Gorai.013G172800 I 0.000
Lus10000463.g Linum usitatissimum Lus10000463.g I 0.000
MDP0000130524 Malus domestica MDP0000130524 I 0.000
MDP0000149841 Malus domestica MDP0000149841 I 0.000
MDP0000199422 Malus domestica MDP0000199422 I 0.000
MDP0000202241 Malus domestica MDP0000202241 I 0.000
MDP0000249507 Malus domestica MDP0000249507 I 0.000
MDP0000253526 Malus domestica MDP0000253526 I 0.000
MDP0000373350 Malus domestica MDP0000373350 I 0.000
MDP0000388684 Malus domestica MDP0000388684 I 0.000
MDP0000442611 Malus domestica MDP0000442611 I 0.000
MDP0000617746 Malus domestica MDP0000617746 I 0.000
MDP0000693146 Malus domestica MDP0000693146 I 0.000
orange1.1g014360m.g Citrus sinensis orange1.1g014360m.g I 0.000
orange1.1g019898m.g Citrus sinensis orange1.1g019898m.g I 0.000
Pavir.Ea02793 Panicum virgatum Pavir.Ea02793 I 0.000
Pavir.J15913 Panicum virgatum Pavir.J15913 I 0.000
Pavir.J24681 Panicum virgatum Pavir.J24681 I 0.000
SapurV1A.0083s0520 Salix purpurea SapurV1A.0083s0520 I 0.000
Thhalv10011534m.g Eutrema salsugineum Thhalv10011534m.g I 0.000
Thhalv10020786m.g Eutrema salsugineum Thhalv10020786m.g I 0.000
PK04257.1 Cannabis sativa PK04257.1 I 0.000
PK12847.1 Cannabis sativa PK12847.1 I 0.000
AMTR_s00224p00009210 Amborella trichopoda AMTR_s00224p00009210 N 0.000