CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_006862
(
Oryza longistaminata
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
OLONG_006862
T194418_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_006862-R1
GATA
104
141
CQNCGTSEKMTPAMRRGPAGPRTLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Oryza longistaminata
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DME_0000578001
Dracunculus medinensis
DME_0000578001
N
TCNE_0000853601
Toxocara canis
TCNE_0000853601
N
TCLT_0000474901
Thelazia callipaeda
TCLT_0000474901
N
scaffold259-EXSNAP2012.8
Pristionchus exspectatus
scaffold259-EXSNAP2012.8
N
OFLC_0000425901
Onchocerca flexuosa
OFLC_0000425901
N
OESDEN_02210
Oesophagostomum dentatum
OESDEN_02210
N
nLs.2.1.2.g03126
Litomosoides sigmodontis
nLs.2.1.2.g03126
N
nDi.2.2.2.g05314
Dirofilaria immitis
nDi.2.2.2.g05314
N
L898_g22922
Steinernema monticolum
L898_g22922
N
L889_g25822
Steinernema feltiae
L889_g25822
N
HPBE_0000675601
Heligmosomoides bakeri
HPBE_0000675601
N
HCOI00597600
Haemonchus contortus
HCOI00597600
N
EVEC_0000523501
Enterobius vermicularis
EVEC_0000523501
N
EEL_0000453801
Elaeophora elaphi
EEL_0000453801
N
WUBG_01280
Wuchereria bancrofti
WUBG_01280
N
DICVIV_11308
Dictyocaulus viviparus
DICVIV_11308
N
BTMF_0000795401
Brugia timori
BTMF_0000795401
N
ASU_13374
Ascaris suum
ASU_13374
N
ASU_03242
Ascaris suum
ASU_03242
N
ASIM_0001210001
Anisakis simplex
ASIM_0001210001
N
ANCCAN_08298
Ancylostoma caninum
ANCCAN_08298
N
ALUE_0000981201
Ascaris lumbricoides
ALUE_0000981201
N
ACOC_0000165301
Angiostrongylus costaricensis
ACOC_0000165301
N
WBGene00238395
Onchocerca volvulus
WBGene00238395
N
Ppa-tlf-1
Pristionchus pacificus
PPA12059
N
LOAG_02128
Loa loa
LOAG_02128
N
Bm3947
Brugia malayi
Bm3947
N