PGSC0003DMG400010684 (Solanum tuberosum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 PGSC0003DMG400010684 T194707_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400027728 GATA 1 25
PGSC0003DMT400027729 GATA 215 252
PGSC0003DMT400027731 GATA 215 252
PGSC0003DMT400027733 GATA 215 252

Links

Other GATA family TFs
Other Solanum tuberosum TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29838.m001723 Ricinus communis 29838.m001723 N 0.851
Ciclev10001533m.g Citrus clementina Ciclev10001533m.g N 0.847
Bostr.15774s0100 Boechera stricta Bostr.15774s0100 N 0.851
Aquca_007_00525 Aquilegia coerulea Aquca_007_00525 N 0.851
mgf001782m Mimulus guttatus mgf001782m N 0.847
Cucsa.160520 Cucumis sativus Cucsa.160520 N 0.847
cassava6877.valid.m1 Manihot esculenta cassava6877.valid.m1 N 0.847
cassava2865.m1 Manihot esculenta cassava2865.m1 N 0.847
cassava1723.valid.m1 Manihot esculenta cassava1723.valid.m1 N 0.851
Ciclev10028671m.g Citrus clementina Ciclev10028671m.g N 0.847
29596.m000719 Ricinus communis 29596.m000719 N 0.847
Pm004389 Prunus mume Pm004389 N 0.847
Cla022485 Citrullus lanatus Cla022485 N 0.847
Ca_01470 Cicer arietinum Ca_01470 N 0.851
VIT_18s0001g07730 Vitis vinifera VIT_18s0001g07730 N 0.847
TRIUR3_23258 Triticum urartu TRIUR3_23258 N 0.816
TRIUR3_15386 Triticum urartu TRIUR3_15386 N 0.819
orange1.1g017195m.g Citrus sinensis orange1.1g017195m.g N 0.847
LjT45A20.140.nd Lotus japonicus LjT45A20.140.nd N 0.847
PK22222.1 Cannabis sativa PK22222.1 N 0.847
SapurV1A.1216s0090 Salix purpurea SapurV1A.1216s0090 N 0.847
SapurV1A.0187s0160 Salix purpurea SapurV1A.0187s0160 N 0.851
SapurV1A.0004s0640 Salix purpurea SapurV1A.0004s0640 N 0.847
Pavir.J38243 Panicum virgatum Pavir.J38243 N 0.820
Pavir.Ib04266 Panicum virgatum Pavir.Ib04266 N 0.820
orange1.1g017348m.g Citrus sinensis orange1.1g017348m.g N 0.847
Traes_4DS_AFCEDDE67 Triticum aestivum Traes_4DS_AFCEDDE67 N 0.820
MDP0000192617 Malus domestica MDP0000192617 N 0.847
Gorai.010G033400 Gossypium raimondii Gorai.010G033400 N 0.847
Gorai.005G226000 Gossypium raimondii Gorai.005G226000 N 0.851
Gorai.002G138300 Gossypium raimondii Gorai.002G138300 N 0.847
gene26538-v1.0-hybrid Fragaria vesca gene26538-v1.0-hybrid N 0.847
evm.TU.supercontig_21.35 Carica papaya evm.TU.supercontig_21.35 N 0.847
Eucgr.F00433 Eucalyptus grandis Eucgr.F00433 N 0.847
MLOC_6017 Hordeum vulgare MLOC_6017 N 0.820
ORGLA01G0401200 Oryza glaberrima ORGLA01G0401200 N 0.820
OPUNC03G27170 Oryza punctata OPUNC03G27170 N 0.820
ONIVA03G31130 Oryza nivara ONIVA03G31130 N 0.820
OMERI03G26130 Oryza meridionalis OMERI03G26130 N 0.820
OLONG_006862 Oryza longistaminata OLONG_006862 N 0.820
OGLUM03G30120 Oryza glumaepatula OGLUM03G30120 N 0.820
OBART03G29860 Oryza barthii OBART03G29860 N 0.820
MTR_3g100040 Medicago truncatula MTR_3g100040 N 0.851
ORUFI03G31080 Oryza rufipogon ORUFI03G31080 N 0.820
MLOC_57142 Hordeum vulgare MLOC_57142 N 0.816
LPERR03G24620 Leersia perrieri LPERR03G24620 N 0.820
GLYMA06G10290 Glycine max GLYMA06G10290 N 0.847
GLYMA04G10340 Glycine max GLYMA04G10340 N 0.847
F775_32334 Aegilops tauschii F775_32334 N 0.820
F775_05698 Aegilops tauschii F775_05698 N 0.819
BRADI1G12330 Brachypodium distachyon BRADI1G12330 N 0.820
GATA18 Oryza indica BGIOSGA010036 N 0.820
GATA18 Oryza sativa OS03G0684000 N 0.820
PGSC0003DMG400009353 Solanum tuberosum PGSC0003DMG400009353 N 0.832
XM_002302327.1 Populus trichocarpa POPTR_0002s11140 N 0.847
POPTR_0005s19550 Populus trichocarpa POPTR_0005s19550 N 0.847
POPTR_0007s03120 Populus trichocarpa POPTR_0007s03120 N 0.847
POPTR_0017s06970 Populus trichocarpa POPTR_0017s06970 N 0.847
PRUPE_ppa008377mg Prunus persica PRUPE_ppa008377mg N 0.847
Sb01g011840 Sorghum bicolor Sb01g011840 N 0.820
Si036492m.g Setaria italica Si036492m.g N 0.820
Solyc01g106040.2 Solanum lycopersicum Solyc01g106040.2 N 0.856
TCM_007358 Theobroma cacao TCM_007358 N 0.847
TCM_034531 Theobroma cacao TCM_034531 N 0.847
Traes_4AL_B6992AAA6 Triticum aestivum Traes_4AL_B6992AAA6 N 0.816
Traes_4BS_ACD70539F Triticum aestivum Traes_4BS_ACD70539F N 0.816