CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0007s03120
(
Populus trichocarpa
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
POPTR_0007s03120
T194889_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0007s03120.1
GATA
214
251
CQHCGISAKDTPAMRRGPAGPRTLCNACGLMWANKGTL
POPTR_0007s03120.2
GATA
214
251
CQHCGISAKDTPAMRRGPAGPRTLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Populus trichocarpa
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
O2
Zea mays
GRMZM2G015534
D
OP2_MAIZE
Zea mays
OP2_MAIZE
D
Sb02g004610
Sorghum bicolor
Sb02g004610
I
Si029970m.g
Setaria italica
Si029970m.g
I