Cla022486 (Citrullus lanatus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cla022486 T195888_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla022486 GATA 206 243

Links

Other GATA family TFs
Other Citrullus lanatus TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.809
29596.m000720 Ricinus communis 29596.m000720 N 0.831
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.836
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.835
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.867
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.809
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.831
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.836
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.831
Pm004390 Prunus mume Pm004390 N 0.836
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.809
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.809
MDP0000303048 Malus domestica MDP0000303048 N 0.836
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.809
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.827
PK04210.1 Cannabis sativa PK04210.1 N 0.831
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.831
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.804
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.836
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.831
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.822
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.836
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.836
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.831
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.827
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.827
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N
TCM_034530 Theobroma cacao TCM_034530 N 0.809
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.820
Ca_14968 Cicer arietinum Ca_14968 N 0.836