Pm021705 (Prunus mume)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Pm021705 T195961_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.853 0.917
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.847 0.806
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.844 0.806
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.844 0.806
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.839 0.861
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.839 0.861
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.833 0.778
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.833 0.778
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.833 0.778
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.833 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.832 0.750
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.832 0.750
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.832 0.750
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.823 0.806
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.819 0.778
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.819 0.750
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.819 0.750
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm021705 GATA 244 279

Links

Other GATA family TFs
Other Prunus mume TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EBF4 Homo sapiens ENSG00000088881 D 0.000
EBF2 Homo sapiens ENSG00000221818 D 0.000
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.000
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.000
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.000
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.000
ENSSTOG00000016352 Ictidomys tridecemlineatus ENSSTOG00000016352 I 0.000
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.000
RPRC005513 Rhodnius prolixus RPRC005513 I 0.000
SINV26263 Solenopsis invicta SINV26263 I 0.000
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.000
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.000
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.000
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.000
LLOJ000215 Lutzomyia longipalpis LLOJ000215 I 0.000
GPUH_0000007401 Gongylonema pulchrum GPUH_0000007401 I 0.000
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.000
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.000
maker-nMf.1.1.scaf01942-snap-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf01942-snap-gene-0.10 I 0.000
EBF1 Otolemur garnettii ENSOGAG00000013992 I 0.000
ENSACAG00000007938 Anolis carolinensis ENSACAG00000007938 I 0.000
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.000
EBF3 Microcebus murinus ENSMICG00000008536 I 0.000
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.000
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.000
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.000
EBF3 Gallus gallus ENSGALG00000010461 I 0.000
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.000
ENSCSAG00000016068 Chlorocebus sabaeus ENSCSAG00000016068 I 0.000
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.000
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.000
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.000
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.000
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.000
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.000