CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29794.m003323
(
Ricinus communis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
29794.m003323
T195992_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29794.m003323
GATA
57
92
CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRA
Links
Other
GATA
family TFs
Other
Ricinus communis
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_04563
Phytophthora parasitica
F443_04563
N
fgenesh_scip_prom.28083.954
Phytophthora lateralis
fgenesh_scip_prom.28083.954
N
fgenesh_scip_prom.46568.3285
Phytophthora kernoviae
fgenesh_scip_prom.46568.3285
N
Phyra84384
Phytophthora ramorum
Phyra84384
N
Physo138557
Phytophthora sojae
Physo138557
N
PITG_10557
Phytophthora infestans
PITG_10557
N
estExt_fgenesh1_kg.C_40161
Phytophthora capsici
estExt_fgenesh1_kg.C_40161
N