orange1.1g022924m.g (Citrus sinensis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 orange1.1g022924m.g T196711_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022924m GATA 201 238
orange1.1g023942m GATA 201 238
orange1.1g024832m GATA 173 210
orange1.1g025137m GATA 201 238
orange1.1g026465m GATA 201 237
orange1.1g026490m GATA 201 237
orange1.1g030237m GATA 92 129

Links

Other GATA family TFs
Other Citrus sinensis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0001s30110 Populus trichocarpa POPTR_0001s30110 N
POPTR_0009s09150 Populus trichocarpa POPTR_0009s09150 N
29842.m003687 Ricinus communis 29842.m003687 N
SapurV1A.0005s0340 Salix purpurea SapurV1A.0005s0340 N
SapurV1A.0692s0040 Salix purpurea SapurV1A.0692s0040 N
SapurV1A.1592s0010 Salix purpurea SapurV1A.1592s0010 N