orange1.1g037152m.g (Citrus sinensis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 orange1.1g037152m.g T196718_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.843 0.806
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.843 0.806
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.843 0.806
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.843 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.837 0.806
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.837 0.806
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.837 0.806
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.837 0.806
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.806
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.832 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.778
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.778
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.778
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.830 0.806
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.823 0.806
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.823 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.823 0.778
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.823 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g037152m GATA 10 45

Links

Other GATA family TFs
Other Citrus sinensis TFs

607 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL1 Arabidopsis thaliana AT2G47070 D 0.000
SPL12 Arabidopsis thaliana AT3G60030 D 0.000
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.000
PK06791.1 Cannabis sativa PK06791.1 D 0.000
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.000
AMTR_s00045p00076020 Amborella trichopoda AMTR_s00045p00076020 I 0.000
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.000
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.000
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.000
BGIOSGA029541 Oryza indica BGIOSGA029541 I 0.000
Bo4g005730 Brassica oleracea Bo4g005730 I 0.000
Bo4g015800 Brassica oleracea Bo4g015800 I 0.000
Bo4g191350 Brassica oleracea Bo4g191350 I 0.000
Bra004674 Brassica rapa Bra004674 I 0.000
Bra016891 Brassica rapa Bra016891 I 0.000
Bra041037 Brassica rapa Bra041037 I 0.000
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I 0.000
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.000
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.000
F775_10743 Aegilops tauschii F775_10743 I 0.000
F775_31139 Aegilops tauschii F775_31139 I 0.000
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.000
GLYMA01G15134 Glycine max GLYMA01G15134 I 0.000
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.000
GLYMA02G30670 Glycine max GLYMA02G30670 I 0.000
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.000
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.000
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.000
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.000
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.000
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.000
GLYMA15G21860 Glycine max GLYMA15G21860 I 0.000
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.000
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.000
GRMZM2G126018 Zea mays GRMZM2G126018 I 0.000
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.000
GRMZM2G160917 Zea mays GRMZM2G160917 I 0.000
GRMZM2G307588 Zea mays GRMZM2G307588 I 0.000
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.000
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.000
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.000
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I 0.000
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.000
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I 0.000
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.000
GSMUA_Achr7G02020_001 Musa acuminata GSMUA_Achr7G02020_001 I 0.000
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.000
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.000
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.000
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.000
LPERR03G34030 Leersia perrieri LPERR03G34030 I 0.000
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.000
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.000
LPERR09G10900 Leersia perrieri LPERR09G10900 I 0.000
MLOC_4830 Hordeum vulgare MLOC_4830 I 0.000
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.000
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.000
MTR_7g092930 Medicago truncatula MTR_7g092930 I 0.000
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.000
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.000
OB03G47050 Oryza brachyantha OB03G47050 I 0.000
OB04G27960 Oryza brachyantha OB04G27960 I 0.000
OB08G26920 Oryza brachyantha OB08G26920 I 0.000
OB08G27190 Oryza brachyantha OB08G27190 I 0.000
OBART03G39900 Oryza barthii OBART03G39900 I 0.000
OBART04G20940 Oryza barthii OBART04G20940 I 0.000
OBART07G15570 Oryza barthii OBART07G15570 I 0.000
OBART09G14800 Oryza barthii OBART09G14800 I 0.000
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I 0.000
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.000
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.000
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.000
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I 0.000
OMERI03G36740 Oryza meridionalis OMERI03G36740 I 0.000
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.000
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.000
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.000
ONIVA03G41820 Oryza nivara ONIVA03G41820 I 0.000
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.000
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.000
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.000
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.000
OPUNC03G37130 Oryza punctata OPUNC03G37130 I 0.000
OPUNC03G37170 Oryza punctata OPUNC03G37170 I 0.000
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.000
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.000
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I 0.000
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.000
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.000
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.000
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I 0.000
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.000
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.000
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.000
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.000
SPL6 Oryza sativa OS03G0833300 I 0.000
SPL7 Oryza sativa OS04G0551500 I 0.000
SPL14 Oryza sativa OS08G0509600 I 0.000
OS09G0491532 Oryza sativa OS09G0491532 I 0.000
PGSC0003DMG400005196 Solanum tuberosum PGSC0003DMG400005196 I 0.000
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.000
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.000
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I 0.000
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.000
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.000
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I 0.000
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.000
PRUPE_ppa000690mg Prunus persica PRUPE_ppa000690mg I 0.000
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.000
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.000
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.000
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.000
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.000
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.000
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.000
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.000
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.000
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.000
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.000
Si013870m.g Setaria italica Si013870m.g I 0.000
Si030195m.g Setaria italica Si030195m.g I 0.000
Si034095m.g Setaria italica Si034095m.g I 0.000
Solyc01g068100.2 Solanum lycopersicum Solyc01g068100.2 I 0.000
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.000
TCM_004922 Theobroma cacao TCM_004922 I 0.000
TCM_005620 Theobroma cacao TCM_005620 I 0.000
TCM_021482 Theobroma cacao TCM_021482 I 0.000
TCM_024873 Theobroma cacao TCM_024873 I 0.000
TCM_031595 Theobroma cacao TCM_031595 I 0.000
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I 0.000
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I 0.000
Traes_5BL_96D5EA4EE Triticum aestivum Traes_5BL_96D5EA4EE I 0.000
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I 0.000
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.000
TRIUR3_33729 Triticum urartu TRIUR3_33729 I 0.000
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.000
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.000
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.000
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.000
VIT_18s0122g00380 Vitis vinifera VIT_18s0122g00380 I 0.000
Ca_03548 Cicer arietinum Ca_03548 I 0.000
Ca_07299 Cicer arietinum Ca_07299 I 0.000
Ca_10879 Cicer arietinum Ca_10879 I 0.000
Ca_16243 Cicer arietinum Ca_16243 I 0.000
Ca_24655 Cicer arietinum Ca_24655 I 0.000
Cla021411 Citrullus lanatus Cla021411 I 0.000
Pm002693 Prunus mume Pm002693 I 0.000
Pm007035 Prunus mume Pm007035 I 0.000
Pm008474 Prunus mume Pm008474 I 0.000
Pm008475 Prunus mume Pm008475 I 0.000
Pm017778 Prunus mume Pm017778 I 0.000
28211.m000132 Ricinus communis 28211.m000132 I 0.000
29269.m000250 Ricinus communis 29269.m000250 I 0.000
29889.m003388 Ricinus communis 29889.m003388 I 0.000
30076.m004574 Ricinus communis 30076.m004574 I 0.000
30174.m008805 Ricinus communis 30174.m008805 I 0.000
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.000
cassava29736.valid.m1 Manihot esculenta cassava29736.valid.m1 I 0.000
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.000
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.000
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.000
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.000
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.000
mgf001202m Mimulus guttatus mgf001202m I 0.000
mgf001295m Mimulus guttatus mgf001295m I 0.000
mgf009459m Mimulus guttatus mgf009459m I 0.000
mgf012995m Mimulus guttatus mgf012995m I 0.000
mgf025134m Mimulus guttatus mgf025134m I 0.000
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.000
Aquca_029_00063 Aquilegia coerulea Aquca_029_00063 I 0.000
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.000
Bostr.25993s0559 Boechera stricta Bostr.25993s0559 I 0.000
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.000
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.000
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.000
Carubv10016658m.g Capsella rubella Carubv10016658m.g I 0.000
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.000
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.000
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.000
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.000
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.000
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.000
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.000
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.000
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.000
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.000
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I 0.000
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.000
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.000
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.000
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I 0.000
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.000
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I 0.000
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.000
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.000
Gorai.007G362000 Gossypium raimondii Gorai.007G362000 I 0.000
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.000
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I 0.000
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.000
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.000
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.000
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.000
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.000
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.000
MDP0000156994 Malus domestica MDP0000156994 I 0.000
MDP0000180408 Malus domestica MDP0000180408 I 0.000
MDP0000180409 Malus domestica MDP0000180409 I 0.000
MDP0000262141 Malus domestica MDP0000262141 I 0.000
MDP0000297978 Malus domestica MDP0000297978 I 0.000
MDP0000589558 Malus domestica MDP0000589558 I 0.000
MDP0000861601 Malus domestica MDP0000861601 I 0.000
MDP0000919693 Malus domestica MDP0000919693 I 0.000
MDP0000919694 Malus domestica MDP0000919694 I 0.000
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.000
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.000
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.000
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.000
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.000
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.000
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.000
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.000
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.000
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.000
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.000
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I 0.000
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I 0.000
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.000
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.000
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I 0.000
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.000
PK11310.1 Cannabis sativa PK11310.1 I 0.000
PK18312.1 Cannabis sativa PK18312.1 I 0.000
chr1.CM0122.330.nc Lotus japonicus chr1.CM0122.330.nc I 0.000
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.000
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.000
GRMZM2G460544 Zea mays GRMZM2G460544 N 0.000
OB09G21350 Oryza brachyantha OB09G21350 N 0.000
OBART08G20010 Oryza barthii OBART08G20010 N 0.000
OLONG_015903 Oryza longistaminata OLONG_015903 N 0.000
OLONG_020138 Oryza longistaminata OLONG_020138 N 0.000
Traes_7DS_E2A582546 Triticum aestivum Traes_7DS_E2A582546 N 0.000