CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr1.CM0289.360.nc
(
Lotus japonicus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
chr1.CM0289.360.nc
T197032_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr1.CM0289.360.nc
GATA
37
74
CTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGAL
Links
Other
GATA
family TFs
Other
Lotus japonicus
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CIMG_03814
Coccidioides immitis
CIMG_03814
N
BDDG_07539
Blastomyces dermatitidis
BDDG_07539
N
CPC735_005060
Coccidioides posadasii
CPC735_005060
N
H101_07867
Trichophyton interdigitale
H101_07867
N
HCBG_07395
Histoplasma capsulatum
HCBG_07395
N
PAAG_04143
Paracoccidioides sp lutzii
PAAG_04143
N
PAAG_07224
Paracoccidioides sp lutzii
PAAG_07224
N
UREG_07471
Uncinocarpus reesii
UREG_07471
N