CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_12143
(
Stagonospora nodorum
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
SNOG_12143
T198801_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_12143
Grainyhead
215
462
EMQEQSPLIGFAGHSYQDNLAAAVQAPPLSSNQNFRYHVTLNAPTAMIKSSDEVPVTYLNKGQAYSISLVDTAPVQTSSGPSEIQEAFIRIFFRGRANSVNRLTLLQLWKEGRGRRAHQRRWPLQAVEFVDPSQVGGGEVQGRPRVEIESSSFDGFVVTWTPVQNTSPECSLAVRFNFLSTDFSHSKGVKGIPVRLCAKTELISEVAGSPQGSLDAELCFCKVKLFRDHGAERKLSNDVAHVKKTIDK
Links
Other
Grainyhead
family TFs
Other
Stagonospora nodorum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_73358
Bipolaris maydis
COCC4DRAFT_73358
N
0.789
COCCADRAFT_31661
Bipolaris zeicola
COCCADRAFT_31661
N
0.798
COCMIDRAFT_22708
Bipolaris oryzae
COCMIDRAFT_22708
N
0.798
COCSADRAFT_167842
Bipolaris sorokiniana
COCSADRAFT_167842
N
0.798
COCVIDRAFT_33378
Bipolaris victoriae
COCVIDRAFT_33378
N
0.798
LEMA_P094790.1
Leptosphaeria maculans
LEMA_P094790.1
N
0.746
PTRG_03180
Pyrenophora triticirepentis
PTRG_03180
N
0.754
PTT_11463
Pyrenophora teres
PTT_11463
N
0.732
SETTUDRAFT_45865
Setosphaeria turcica
SETTUDRAFT_45865
N
0.771
SNOG_12143
Phaeosphaeria nodorum
SNOG_12143
N
1.000
estExt_fgenesh1_pm.C_100134
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_100134
N
0.789