CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000013882
(
Tarsius syrichta
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
ENSTSYG00000013882
T199281_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFCP2L1
M04885_2.00
Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX
0.995
0.995
TFCP2L1
M10609_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP9_01
0.995
0.995
TFCP2L1
M04886_2.00
Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX
0.995
0.995
Tcfcp2l1
M08029_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1
0.966
0.966
Tcfcp2l1
M08030_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1
0.966
0.966
Tcfcp2l1
M09127_2.00
Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH
Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C
0.966
0.966
ENSGALG00000002235
M02030_2.00
Gallus gallus
AACCGGTTA
TAACCGGTT
PBM
Weirauch et al.(2014)
pTH8565
0.840
0.840
UBP1
M04893_2.00
Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN
SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX
0.782
0.782
UBP1
M10614_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6_01
0.782
0.782
UBP1
M10615_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6
0.782
0.782
UBP1
M04894_2.00
Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH
SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX
0.782
0.782
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000012738
Grainyhead
7
219
PFKQEEPQLSPENEARLPPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPAKRASAFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQ
Links
Other
Grainyhead
family TFs
Other
Tarsius syrichta
TFs
193 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSTOG00000023146
Ictidomys tridecemlineatus
ENSSTOG00000023146
N
NPAS4
Otolemur garnettii
ENSOGAG00000010446
N
ENSONIG00000005476
Oreochromis niloticus
ENSONIG00000005476
N
NPAS4
Ochotona princeps
ENSOPRG00000008977
N
npas4a
Oryzias latipes
ENSORLG00000001999
N
ENSPANG00000007006
Papio anubis
ENSPANG00000007006
N
ENSPFOG00000009551
Poecilia formosa
ENSPFOG00000009551
N
ENSPPYG00000003026
Pongo abelii
ENSPPYG00000003026
N
NPAS4
Pan troglodytes
ENSPTRG00000003923
N
NPAS4
Pteropus vampyrus
ENSPVAG00000001233
N
Npas4
Rattus norvegicus
ENSRNOG00000020009
N
NPAS4
Sorex araneus
ENSSARG00000003603
N
ENSSHAG00000009488
Sarcophilus harrisii
ENSSHAG00000009488
N
NPAS4
Sus scrofa
ENSSSCG00000012942
N
NPAS4
Oryctolagus cuniculus
ENSOCUG00000000905
N
npas4a
Tetraodon nigroviridis
ENSTNIG00000016823
N
npas4a
Takifugu rubripes
ENSTRUG00000011857
N
ENSTSYG00000001991
Tarsius syrichta
ENSTSYG00000001991
N
NPAS4
Tursiops truncatus
ENSTTRG00000001951
N
ENSXMAG00000013170
Xiphophorus maculatus
ENSXMAG00000013170
N
Alligator_sinensis_CCG003708.1
Alligator sinensis
Alligator_sinensis_CCG003708.1
N
Cmyd_10013223
Chelonia mydas
Cmyd_10013223
N
ENSBTAP00000019870-D1
Bos grunniens
ENSBTAP00000019870-D1
N
ENSP00000311196
Macaca fascicularis
ENSP00000311196
N
Myotis_brandtii_NPAS4_10030769
Myotis brandtii
Myotis_brandtii_NPAS4_10030769
N
Ogr08183
Ophisaurus gracilis
Ogr08183
N
Pvit_07066
Pogona vitticeps
Pvit_07066
N
npas4
Xenopus tropicalis
XB-GENE-993002
N
npas4a
Gasterosteus aculeatus
ENSGACG00000017076
N
ENSAMXG00000008132
Astyanax mexicanus
ENSAMXG00000008132
N
NPAS4
Canis familiaris
ENSCAFG00000012711
N
NPAS4
Callithrix jacchus
ENSCJAG00000001482
N
NPAS4
Cavia porcellus
ENSCPOG00000000685
N
ENSCSAG00000008212
Chlorocebus sabaeus
ENSCSAG00000008212
N
npas4a
Danio rerio
ENSDARG00000055752
N
npas4b
Danio rerio
ENSDARG00000087753
N
NPAS4
Dasypus novemcinctus
ENSDNOG00000042408
N
NPAS4
Equus caballus
ENSECAG00000013683
N
NPAS4
Erinaceus europaeus
ENSEEUG00000004685
N
NPAS4
Echinops telfairi
ENSETEG00000003654
N
NPAS4
Felis catus
ENSFCAG00000009299
N
NPAS4
Homo sapiens
ENSG00000174576
N
ENSAMEG00000017065
Ailuropoda melanoleuca
ENSAMEG00000017065
N
NPAS4
Gorilla gorilla
ENSGGOG00000008608
N
ENSGMOG00000003455
Gadus morhua
ENSGMOG00000003455
N
NPAS4
Loxodonta africana
ENSLAFG00000011138
N
ENSLOCG00000000650
Lepisosteus oculatus
ENSLOCG00000000650
N
ENSMEUG00000004384
Macropus eugenii
ENSMEUG00000004384
N
NPAS4
Microcebus murinus
ENSMICG00000003754
N
NPAS4
Myotis lucifugus
ENSMLUG00000004042
N
NPAS4
Macaca mulatta
ENSMMUG00000015982
N
NPAS4
Monodelphis domestica
ENSMODG00000008299
N
ENSMPUG00000003040
Mustela putorius furo
ENSMPUG00000003040
N
Npas4
Mus musculus
ENSMUSG00000045903
N
ENSNLEG00000006104
Nomascus leucogenys
ENSNLEG00000006104
N
ENSOARG00000005005
Ovis aries
ENSOARG00000005005
N