CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra014251
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra014251
T199979_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra014251.1-P
GRAS
56
442
LIHLLLTCANHVASGSLQNANAALEQLSLLSSPDGDTMQRVAAYFTEALANRILKSWPGLYKALNATQTRTSNVSEEVHVRRLFFDMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALIQAFNSRPEGPPHLRITGVHHQKEVLDQMAHRLIEEAEKLDIPFQFNPVVSSLQCLNVEQLRVKTGEALAVSSVLQLHNLLASDVTSNNGHSLSGDSASSLPLSNSGKIDSFLNAIWGLSPKIMVVTEQDSDHNGSTVMERLLESLYTYAALFDCLETKVPRTSQDRMKVEKMLFGEEIKNIIACEGSERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGYGFDGYRIKEESGCAVICWQDRPLYSVSAWR
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Q8GZQ2_MAIZE
Zea mays
Q8GZQ2_MAIZE
D
GRMZM2G124037
Zea mays
GRMZM2G124037
I
Sb02g030310
Sorghum bicolor
Sb02g030310
I
DREB1H
Oryza sativa
OS09G0522100
I
ORUFI09G18200
Oryza rufipogon
ORUFI09G18200
I
ORGLA09G0133100
Oryza glaberrima
ORGLA09G0133100
I
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
ONIVA09G17890
Oryza nivara
ONIVA09G17890
I
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
OGLUM09G17420
Oryza glumaepatula
OGLUM09G17420
I
MLOC_74460
Hordeum vulgare
MLOC_74460
I
GRMZM2G069082
Zea mays
GRMZM2G069082
I
Si030869m.g
Setaria italica
Si030869m.g
I
BRADI4G35630
Brachypodium distachyon
BRADI4G35630
I
BRADI4G35610
Brachypodium distachyon
BRADI4G35610
I
Traes_5BL_60510E4A7
Triticum aestivum
Traes_5BL_60510E4A7
I
BRADI3G57360
Brachypodium distachyon
BRADI3G57360
I
BRADI2G60340
Brachypodium distachyon
BRADI2G60340
I
DREB1H
Oryza indica
BGIOSGA029416
I
Pavir.Fa00114
Panicum virgatum
Pavir.Fa00114
N
Traes_5BL_0C3609EF0
Triticum aestivum
Traes_5BL_0C3609EF0
N
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
F775_18881
Aegilops tauschii
F775_18881
N
BRADI4G35600
Brachypodium distachyon
BRADI4G35600
N
BRADI4G35590
Brachypodium distachyon
BRADI4G35590
N
BRADI4G35570
Brachypodium distachyon
BRADI4G35570
N
BRADI1G57970
Brachypodium distachyon
BRADI1G57970
N