CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI4G43200
(
Brachypodium distachyon
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
BRADI4G43200
T200058_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G43200.1
GRAS
52
522
LIGLLYQCAAEVAAGALDRANLCLEHIMQLASLDAPHALQRLAAVFADALARKLLNLVPGLSRALLTSSSSSSSPSPAGTSSGDAARRHMFDMLPFLKLAYLTTNHAILEAMEGERFVHVVDLSGPAANPAQWIALFHAFRGRSRDGQGVFPHLRVTAVHESKEFLGAMAASLAREAEAFDIPFQFAGVESRLEDLDSAALRHCLRVRSGEALAVSVALQLHRLLAADDDGRCRRHPGGGLTPLQSILAARSSPRSPSSGGSSSFGELLERELNTRLQLSPDASSYNSPQYSSPTMSAFSSSGSGKPKLESFLSAIKALSPKVMVITEQEANHNGAAFHERFDEALNYYASLFDCLERASSGQGQHRSNSAAERARVVERAVLGEEIRSIVASEGRERKERHERAAQWAGRMEASGMERVGLSYGGAMEARKLLQSCGLGGGGYQVRHDVQEQRFFFCWHDRPLYAVSAWR
Links
Other
GRAS
family TFs
Other
Brachypodium distachyon
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC198366.3_FG004
Zea mays
AC198366.3_FG004
N
0.748
BGIOSGA034523
Oryza indica
BGIOSGA034523
N
0.763
F775_04821
Aegilops tauschii
F775_04821
N
0.753
MLOC_7637
Hordeum vulgare
MLOC_7637
N
0.808
OBART11G02570
Oryza barthii
OBART11G02570
N
0.714
OGLUM11G02250
Oryza glumaepatula
OGLUM11G02250
N
0.800
OPUNC11G02370
Oryza punctata
OPUNC11G02370
N
0.825
OPUNC12G02310
Oryza punctata
OPUNC12G02310
N
0.751
OS11G0141500
Oryza sativa
OS11G0141500
N
0.760
OS12G0138100
Oryza sativa
OS12G0138100
N
0.760
Si009933m.g
Setaria italica
Si009933m.g
N
0.745
Traes_5BL_ED508277A
Triticum aestivum
Traes_5BL_ED508277A
N
0.797
TRIUR3_19255
Triticum urartu
TRIUR3_19255
N
0.740
Pavir.Cb02147
Panicum virgatum
Pavir.Cb02147
N
0.739
Pavir.Hb01986
Panicum virgatum
Pavir.Hb01986
N
0.729