CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr4G16460_001
(
Musa acuminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GSMUA_Achr4G16460_001
T200371_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr4P16460_001
GRAS
131
530
ASHLLPECARAVAERNSQRVQQLMWMLNELSTPYGDVDQKLASYFLQGLFARLTSSGPRTLLSLSAASDHNCSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLQSSSSSRTQRFHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVSSPSSSSSSAPSSSMQRVMKEIGQRMEKFARLMGVPFRFNVVNHPGNLLDLDLDRLDLREGGAAALAVNCVNTLHGVSPAGCRRDTLFAAFRRLQPRILTIVEEEAELDAAAGGEEDRDAFLKVFGESLRFFSAYYETLEESFPRTSNERLALERAAGRAVVDLVACPAAESTERRDTAAGWSRRMQAAGFEPAQFSDDVADDARALLRRYRKGWSMRVAEVAGRGAGIFLEWKEQPVVWASAWK
Links
Other
GRAS
family TFs
Other
Musa acuminata
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si034653m.g
Setaria italica
Si034653m.g
N
0.732
OPUNC07G19280
Oryza punctata
OPUNC07G19280
N
0.770
ORGLA03G0208800
Oryza glaberrima
ORGLA03G0208800
N
0.751
ORGLA07G0156800
Oryza glaberrima
ORGLA07G0156800
N
0.770
ORUFI03G23130
Oryza rufipogon
ORUFI03G23130
N
0.751
ORUFI07G21310
Oryza rufipogon
ORUFI07G21310
N
0.772
SHR2
Oryza sativa
OS03G0433200
N
0.751
SHR1
Oryza sativa
OS07G0586900
N
0.772
Sb02g037890
Sorghum bicolor
Sb02g037890
N
0.767
Si029296m.g
Setaria italica
Si029296m.g
N
0.767
OPUNC03G21050
Oryza punctata
OPUNC03G21050
N
0.745
Traes_2AS_D0B21BF981
Triticum aestivum
Traes_2AS_D0B21BF981
N
0.732
Traes_2BS_736EF207B1
Triticum aestivum
Traes_2BS_736EF207B1
N
0.759
Traes_2DS_3B4535629
Triticum aestivum
Traes_2DS_3B4535629
N
0.733
TRIUR3_26966
Triticum urartu
TRIUR3_26966
N
0.840
Pavir.Ba01071
Panicum virgatum
Pavir.Ba01071
N
0.759
Pavir.Bb01182
Panicum virgatum
Pavir.Bb01182
N
0.759
Pavir.Ia02979
Panicum virgatum
Pavir.Ia02979
N
0.734
Pavir.Ib01878
Panicum virgatum
Pavir.Ib01878
N
0.710
MLOC_62665
Hordeum vulgare
MLOC_62665
N
0.764
SHR1
Oryza indica
BGIOSGA026037
N
0.770
BRADI1G23060
Brachypodium distachyon
BRADI1G23060
N
0.754
GRMZM2G019060
Zea mays
GRMZM2G019060
N
0.751
GRMZM2G132794
Zea mays
GRMZM2G132794
N
0.740
GRMZM2G172657
Zea mays
GRMZM2G172657
N
0.764
GSMUA_Achr1G22470_001
Musa acuminata
GSMUA_Achr1G22470_001
N
0.827
GSMUA_Achr8G30950_001
Musa acuminata
GSMUA_Achr8G30950_001
N
0.812
LPERR07G17740
Leersia perrieri
LPERR07G17740
N
0.772
SHR2
Oryza indica
BGIOSGA010480
N
0.751
OB03G31410
Oryza brachyantha
OB03G31410
N
0.735
OBART07G20430
Oryza barthii
OBART07G20430
N
0.703
OGLUM03G23190
Oryza glumaepatula
OGLUM03G23190
N
0.751
OGLUM07G20210
Oryza glumaepatula
OGLUM07G20210
N
0.772
OMERI03G20220
Oryza meridionalis
OMERI03G20220
N
0.751
OMERI07G17100
Oryza meridionalis
OMERI07G17100
N
0.772
ONIVA03G24000
Oryza nivara
ONIVA03G24000
N
0.751
ONIVA07G18840
Oryza nivara
ONIVA07G18840
N
0.770