CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr6G11780_001
(
Musa acuminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GSMUA_Achr6G11780_001
T200381_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr6P11780_001
GRAS
1
342
MVSIQGDPPQRLSAYMVEGLAARIASSGRGLYKALKCKEPPTSDQLSAMQILFEVCPCFKFGYMAANYIIIEAFRDEEKVHIIDFDLNQGSQYINLIQTLSTWPHKPPHLRISAVDDPESVQRAVGGLEIIGRRLEKLAEELGVPFEFSAIAVKSGDVTPGMLDRRLGEALVVNFAFQLHHMPDESVSTVNQRDELLRMVKGLGPKLVTVVEQDMNTNTAPFLPRFMEVYNYYSAVFDSLDATLPRDSSDRMNVERQCLARDIVNIVACEGADRIERYEVAGKWRARMTMAGFVSCPFGTNVNGLVRALSGSYCDRYKIKEESGALYFGWEDKTLVVTSAWR
Links
Other
GRAS
family TFs
Other
Musa acuminata
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA04G42090
Glycine max
GLYMA04G42090
N
0.744
GSMUA_Achr10G17290_001
Musa acuminata
GSMUA_Achr10G17290_001
N
0.816
GSMUA_Achr3G02410_001
Musa acuminata
GSMUA_Achr3G02410_001
N
0.791
OLONG_003002
Oryza longistaminata
OLONG_003002
N
0.735
TCM_035362
Theobroma cacao
TCM_035362
N
0.707
Ca_13101
Cicer arietinum
Ca_13101
N
0.743
cassava26784.m1
Manihot esculenta
cassava26784.m1
N
0.713
Aquca_014_00370
Aquilegia coerulea
Aquca_014_00370
N
0.732
Ciclev10000671m.g
Citrus clementina
Ciclev10000671m.g
N
0.705
Gorai.005G083700
Gossypium raimondii
Gorai.005G083700
N
0.703
MDP0000859087
Malus domestica
MDP0000859087
N
0.710
orange1.1g007853m.g
Citrus sinensis
orange1.1g007853m.g
N
0.705
chr1.CM0982.460.nd
Lotus japonicus
chr1.CM0982.460.nd
N
0.789
PDK_20s1392371g003
Phoenix dactylifera
PDK_20s1392371g003
N
0.739