CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si024429m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si024429m.g
T201509_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si024429m
GRAS
78
454
LVHLLVTCTGAIQAGDYSAAHGNLAEARSILAVIANSTGMGRVATHFADALAQRLFPAYPNAAPPAPPHTATAEQYSHFYDAGPYLNFAYSTANQAILDAFEGCDRVHVVDFALMQGLQWPSLIHALSKREGGPPRLRITGIGPHPTGAGDELREVGIRLADFARSLGVPFCFRGVCVDQLDGLSKWMLKIVPGEALAFNSIMQLHRLLVDPDADPAVPAPIDILLDLVTELQPRIFTVVEQEADHNRPPLLERFTNALFHYAAMFDSMVAAGNHAAGGSSTCSLAEAYLRSEIFDIVCGEGSARAERHELLGRWRERLARAGLTQVLFGPNEVRLATAQLISATSFSGDGYSILECAGSLALAWHDRPLYAATAWR
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Aa01633
Panicum virgatum
Pavir.Aa01633
N
0.747
Pavir.Ca00986
Panicum virgatum
Pavir.Ca00986
N
0.825
Pavir.J27495
Panicum virgatum
Pavir.J27495
N
0.741