30024.m001746 (Ricinus communis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 30024.m001746 T202027_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
30024.m001746 GRAS 27 448

Links

Other GRAS family TFs
Other Ricinus communis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.751
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.703
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.830
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.755
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.729
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.792
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.751
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.810
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.748
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.860
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.745
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.756
mgf022906m Mimulus guttatus mgf022906m N 0.712
mgf008315m Mimulus guttatus mgf008315m N 0.710
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.756
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.877
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.742
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.751
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.800
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.805
PK02707.1 Cannabis sativa PK02707.1 N 0.715
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.748
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.753
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.847
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.748
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.805
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.890
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.715
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.715
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.773
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.773
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.747
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.734
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.737
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.775
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.860
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.742
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.762
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.762
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.781
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.803
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.753
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.764
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.830
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.712
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.715
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.742
Bra018848 Brassica rapa Bra018848 N 0.732
Bra014251 Brassica rapa Bra014251 N 0.729
Bo6g022200 Brassica oleracea Bo6g022200 N 0.726
Bo3g179450 Brassica oleracea Bo3g179450 N 0.734
Ca_11133 Cicer arietinum Ca_11133 N 0.788
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.773
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.773
30131.m007244 Ricinus communis 30131.m007244 N 0.767
Pm029840 Prunus mume Pm029840 N 0.732
Pm016466 Prunus mume Pm016466 N 0.732
Pm012190 Prunus mume Pm012190 N 0.830
Cla006433 Citrullus lanatus Cla006433 N 0.764
Ca_27441 Cicer arietinum Ca_27441 N 0.811
SCL3 Arabidopsis thaliana AT1G50420 N 0.753
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.749
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.816
TCM_042392 Theobroma cacao TCM_042392 N 0.759
TCM_040833 Theobroma cacao TCM_040833 N 0.863
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.775
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.744
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.732