CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava1375.valid.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava1375.valid.m1
T202043_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava1375.valid.m1
GRAS
46
470
LIHLLLACANHVAAGSVENANISLEQISHLASADGDTMQRIAAYFTEALADRILRKGWPGLHRALTFTKKSLVSEELLVQRLFFELFPFLKLAYVITNQAIIEAMEGEKMVHIIDLNSFEPAQWIDLLQTLSARPEGPPHLRITGIHEQKEVLDQMALRLTEEAEKLDIPFQFNPIVSKLEDLDIESLRVKTGEALAVSSVLQLHSLLAVDDEILKGNSPSASKNPNPSHFQRALQINKNKRTLGELLEKDLVHVYGASPDSALSPLSLAPSPKMGSFLSALWGLSPKLMVITEQESNHNGFTLMERVTEALNFYAALFDCLESTVSRASVERQKVEKMLFGEEIKNIIACEGTDRKERHEKLEKWILRLELAGFGRVPLSYHGILQASRLLQSYGYDGYKIKEENGCLVICWHSRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.E02054
Eucalyptus grandis
Eucgr.E02054
N
Eucgr.L03694
Eucalyptus grandis
Eucgr.L03694
N
Eucgr.L02104
Eucalyptus grandis
Eucgr.L02104
N
Eucgr.L01802
Eucalyptus grandis
Eucgr.L01802
N
Eucgr.L01801
Eucalyptus grandis
Eucgr.L01801
N
Eucgr.E04373
Eucalyptus grandis
Eucgr.E04373
N
Eucgr.E04371
Eucalyptus grandis
Eucgr.E04371
N
Eucgr.E04365
Eucalyptus grandis
Eucgr.E04365
N
Eucgr.E02060
Eucalyptus grandis
Eucgr.E02060
N
Eucgr.E02057
Eucalyptus grandis
Eucgr.E02057
N
Eucgr.E02029
Eucalyptus grandis
Eucgr.E02029
N
Eucgr.E02053
Eucalyptus grandis
Eucgr.E02053
N
Eucgr.E02051
Eucalyptus grandis
Eucgr.E02051
N
Eucgr.E02050
Eucalyptus grandis
Eucgr.E02050
N
Eucgr.E02048
Eucalyptus grandis
Eucgr.E02048
N
Eucgr.E02047
Eucalyptus grandis
Eucgr.E02047
N
Eucgr.E02046
Eucalyptus grandis
Eucgr.E02046
N
Eucgr.E02044
Eucalyptus grandis
Eucgr.E02044
N
Eucgr.E02039
Eucalyptus grandis
Eucgr.E02039
N