CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.201400
(
Cucumis sativus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cucsa.201400
T202140_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.201400.1
GRAS
216
589
VLKVLLDCARLCDSEPNRAAKTLNRISKSLREDGDPIERVGFYFGDALRKRLSSTPMKNCLDSTESDANSEDFLLSYKALNDACPYSKFAHLTANQAILEVTERASKIHIVDFGIVQGVQWAALLQALATRATGKPVRVRISGIPAPSLGDSPAASLYATGNRLSEFAKLLELNFEFQPILTPIENLKESSFSVQSDEVLAVNFMLQLYNLLDENPTGVHNALRLAKSLSPHIVTLGEYEASLNRNGFYNRFKNALKFYSAIFESLEPNLPRNSPERLQLERLLLGRRIAGVVGTVEDSRRERRVRMEDKEQWKNLMENTGFEPVALSHYAISQAKILLWNYNYSSLYTLIESAPEFLSLAWNDVPLLTVSSWR
Links
Other
GRAS
family TFs
Other
Cucumis sativus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava35611.valid.m1
Manihot esculenta
cassava35611.valid.m1
N
0.716
PK13108.1
Cannabis sativa
PK13108.1
N
0.721
SapurV1A.1131s0040
Salix purpurea
SapurV1A.1131s0040
N
0.711
MDP0000575908
Malus domestica
MDP0000575908
N
0.712
Gorai.008G068100
Gossypium raimondii
Gorai.008G068100
N
0.738
Gorai.003G015400
Gossypium raimondii
Gorai.003G015400
N
0.738
gene14780-v1.0-hybrid
Fragaria vesca
gene14780-v1.0-hybrid
N
0.719
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
0.716
Cagra.0926s0026
Capsella grandiflora
Cagra.0926s0026
N
0.700
Aquca_010_00478
Aquilegia coerulea
Aquca_010_00478
N
0.705
Cucsa.127390
Cucumis sativus
Cucsa.127390
N
0.711
GLYMA11G09761
Glycine max
GLYMA11G09761
N
0.707
cassava18797.valid.m1
Manihot esculenta
cassava18797.valid.m1
N
0.727
29634.m002156
Ricinus communis
29634.m002156
N
0.734
Pm026616
Prunus mume
Pm026616
N
0.733
Cla014744
Citrullus lanatus
Cla014744
N
0.904
Cla014426
Citrullus lanatus
Cla014426
N
0.706
TCM_000399
Theobroma cacao
TCM_000399
N
0.763
PRUPE_ppa003124mg
Prunus persica
PRUPE_ppa003124mg
N
0.736
POPTR_0007s12760
Populus trichocarpa
POPTR_0007s12760
N
0.702
POPTR_0005s12520
Populus trichocarpa
POPTR_0005s12520
N
0.702