CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.0239s0069
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.0239s0069
T202308_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0239s0069.1.p
GRAS
265
635
IIEQLFNAAELIGTTGNTNGDHTVLAQGILARLNHHLNSNHKSPFQRAASHIAEALLSLIHNDSSPPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSILESCNDSGFDRIHIIDFDVGYGGQWSSLMQELASGGGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEVELLSIELLLNPAYWPLSLRSSEKEAIAVNLPINSVVPGYLPLILRFLKQISPNVVVCSDRGCDRNDAPFPNAVIHALQYHTTLLESLDANQNQDDSSIERFWVQPSIEKLLMKRHRWIERSHPWRSLITQCGFSPASLSQTAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWK
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA18G49690
Glycine max
GLYMA18G49690
I
POPTR_0005s14450
Populus trichocarpa
POPTR_0005s14450
I
Ca_22078
Cicer arietinum
Ca_22078
I
BGIOSGA005146
Oryza indica
BGIOSGA005146
N
BRADI2G60620
Brachypodium distachyon
BRADI2G60620
N
OMERI01G40580
Oryza meridionalis
OMERI01G40580
N
ONIVA01G49740
Oryza nivara
ONIVA01G49740
N
OPUNC01G42700
Oryza punctata
OPUNC01G42700
N
ORGLA01G0376000
Oryza glaberrima
ORGLA01G0376000
N
ORUFI01G47190
Oryza rufipogon
ORUFI01G47190
N
OS01G0946200
Oryza sativa
OS01G0946200
N