CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10019094m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10019094m.g
T202400_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10019094m
GRAS
343
701
ITDQIFKASELIETGNPVHAQGILARLNHQLSPIGKPFQRAAFYFKEALQLLLHMNMNNSSLALSGYSIIFKISAYKSFSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPFELEILSLEALNSASLALPLRGLESEATAVNLPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFLVYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQSSLALCWQRKELILATAWR
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC08G07030
Oryza punctata
OPUNC08G07030
N
Pavir.Ib04452
Panicum virgatum
Pavir.Ib04452
N
Pavir.Ia00050
Panicum virgatum
Pavir.Ia00050
N
Pavir.Ha01929
Panicum virgatum
Pavir.Ha01929
N
TRIUR3_06257
Triticum urartu
TRIUR3_06257
N
Traes_5DL_8DC4CC983
Triticum aestivum
Traes_5DL_8DC4CC983
N
Traes_5BL_B1F704307
Triticum aestivum
Traes_5BL_B1F704307
N
Traes_4AL_A0565AC4C
Triticum aestivum
Traes_4AL_A0565AC4C
N
Si034994m.g
Setaria italica
Si034994m.g
N
Sb01g000390
Sorghum bicolor
Sb01g000390
N
OS08G0242800
Oryza sativa
OS08G0242800
N
ORUFI08G08440
Oryza rufipogon
ORUFI08G08440
N
ORGLA08G0064000
Oryza glaberrima
ORGLA08G0064000
N
BGIOSGA028267
Oryza indica
BGIOSGA028267
N
OMERI03G18460
Oryza meridionalis
OMERI03G18460
N
OLONG_007958
Oryza longistaminata
OLONG_007958
N
OGLUM08G08160
Oryza glumaepatula
OGLUM08G08160
N
OBART08G07320
Oryza barthii
OBART08G07320
N
OB08G17050
Oryza brachyantha
OB08G17050
N
MLOC_4725
Hordeum vulgare
MLOC_4725
N
LPERR08G06520
Leersia perrieri
LPERR08G06520
N
GSMUA_Achr4G30300_001
Musa acuminata
GSMUA_Achr4G30300_001
N
GSMUA_Achr11G17050_001
Musa acuminata
GSMUA_Achr11G17050_001
N
GRMZM2G144196
Zea mays
GRMZM2G144196
N
F775_07378
Aegilops tauschii
F775_07378
N
BRADI1G00750
Brachypodium distachyon
BRADI1G00750
N