CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.L03490
(
Eucalyptus grandis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Eucgr.L03490
T202504_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.L03490.1
GRAS
109
489
LVHLLMAAAEALTGVNKCHELARVILVRLKELVSPTDGTNMERLAAYFTEALQGLLEGAGGGHGKHLISGGPQRDDHHHHQTDVLAAFQLMQDMSPYVKFGHFTANQAILEAVTQHRRVHIVDYDIMEGIQWASLMQALVSRKNGPPAPHLRITALSRGGNGRRSIGTIQEMGRRLTAFATSIGQPFSFHQCRLDSDKTFRPSSLKLVRGEALIFNCMLHLPHFSYRAPESVASFLSGAKTLNPRLVTLVEEELGPIGDQGFVSRFIDSLHHYSALYDSLEAGFPMQRRARALVERVFLGPRIVGSLGRIYRTRGDEEGGSWRERLGATGFRPVDISFANHCQAKLLLGLFNDGYRVEELASNRLVLGWKSRRLLSASIWS
Links
Other
GRAS
family TFs
Other
Eucalyptus grandis
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10028056.g
Linum usitatissimum
Lus10028056.g
N
0.742
cassava44367.m1
Manihot esculenta
cassava44367.m1
N
0.845
Aquca_014_00175
Aquilegia coerulea
Aquca_014_00175
N
0.776
Ciclev10000940m.g
Citrus clementina
Ciclev10000940m.g
N
0.834
evm.TU.supercontig_36.32
Carica papaya
evm.TU.supercontig_36.32
N
0.799
gene11137-v1.0-hybrid
Fragaria vesca
gene11137-v1.0-hybrid
N
0.820
Gorai.009G244200
Gossypium raimondii
Gorai.009G244200
N
0.815
Gorai.010G048800
Gossypium raimondii
Gorai.010G048800
N
0.832
Lus10008316.g
Linum usitatissimum
Lus10008316.g
N
0.764
cassava32027.m1
Manihot esculenta
cassava32027.m1
N
0.793
MDP0000319342
Malus domestica
MDP0000319342
N
0.798
MDP0000884524
Malus domestica
MDP0000884524
N
0.777
orange1.1g011012m.g
Citrus sinensis
orange1.1g011012m.g
N
0.829
SapurV1A.0010s0900
Salix purpurea
SapurV1A.0010s0900
N
0.784
SapurV1A.0105s0110
Salix purpurea
SapurV1A.0105s0110
N
0.817
LjT15C06.70.nc
Lotus japonicus
LjT15C06.70.nc
N
0.743
LjT26J05.10.nc
Lotus japonicus
LjT26J05.10.nc
N
0.758
GLYMA04G43090
Glycine max
GLYMA04G43090
N
0.763
29908.m006159
Ricinus communis
29908.m006159
N
0.821
Pm004863
Prunus mume
Pm004863
N
0.820
Ca_26279
Cicer arietinum
Ca_26279
N
0.768
Ca_23494
Cicer arietinum
Ca_23494
N
0.701
VIT_18s0001g03310
Vitis vinifera
VIT_18s0001g03310
N
0.872
TCM_035069
Theobroma cacao
TCM_035069
N
0.853
Solyc11g013150.1
Solanum lycopersicum
Solyc11g013150.1
N
0.780
PRUPE_ppa018977mg
Prunus persica
PRUPE_ppa018977mg
N
0.812
POPTR_0005s15900
Populus trichocarpa
POPTR_0005s15900
N
0.828
POPTR_0002s08660
Populus trichocarpa
POPTR_0002s08660
N
0.796
PGSC0003DMG400012071
Solanum tuberosum
PGSC0003DMG400012071
N
0.788
MTR_5g058860
Medicago truncatula
MTR_5g058860
N
0.712
MTR_3g072710
Medicago truncatula
MTR_3g072710
N
0.755
GLYMA13G02840
Glycine max
GLYMA13G02840
N
0.700
GLYMA06G11610
Glycine max
GLYMA06G11610
N
0.759