CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_197.7
(
Carica papaya
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
evm.TU.supercontig_197.7
T202518_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_197.7
GRAS
46
451
LIHLLVACANHVAANNIENANIGLEQISHLASSDGDTMQRIAAYFTEAFADRMLKGWPGLHKALNSTKIISIYEKILVQKLFFELCPFLKLAYVITNQAIVEAMEGEKMVHIIDLNSFEPAQWVNLLQTLSARPEGPPHLRITGIHEKKEVLEQMALRLTGEAEKLDIPFQFNPIVSKLENLDIESLRVKTGEALAVSSVLQLHSLLANDDDIHQGKSLSTSSNLRKVLQVNQRTLGDWLEKDVLVYSPTADSQKMGRFLSALWGLSPKLMVITEQESNHNGCTLMERVMEALYFYAALFDCLESTVSRSSVERQKVEKMLFGEEIKNIIACEGVERKERHEKLEKWILRLELAGFGKVPLSYHGMLQATRLLQSYGYDGYRIKDENGFLLICWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Carica papaya
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAL63_YEASX
Saccharomyces cerevisiae
MAL63_YEASX
D
YPR196W
Saccharomyces cerevisiae
YPR196W
D
SKUD_144802
Saccharomyces kudriavzevii
SKUD_144802
I
SKUD_186105
Saccharomyces kudriavzevii
SKUD_186105
I
22689_YPR196W
Saccharomyces paradoxus
22689_YPR196W
I
8988_Multiple
Saccharomyces mikatae
8988_Multiple
I
9515_Multiple
Saccharomyces paradoxus
9515_Multiple
I
9523_Multiple
Saccharomyces paradoxus
9523_Multiple
I