CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.002G110100
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.002G110100
T202606_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G110100.1
GRAS
150
520
LVHLLLACAEAVGCRDIHLATSMLSQIGASATPLGDSLQRVSYCFATGLKSRLSLLQNVNGNGTITNCAIDVPMIAREEKMEAFQLLYQTTPYIAFGFMAANEAICQAAQGKGSLHIIDLGMKHTLQWPSLIRALASRPEGPPTLRITALTSDEDLVELEASMKSLVEDASSLSIAMEFHMISEPVTPSLMTRENLNLREGESLYINSVMHLHKYVKESRGSLKAILQAIKKLGPALLTMVEQDANHNGPFFLGRFLESLHYYSAIFDSLEASLPRHSPQRMKIERLHFAEEIRNIVAYEGTDRMERHERADQWRRQLGRAGFQVMGLKCLSQARMMLSVYGCDGYTLGSEKGCLLLGWKGRPLMLASAWQ
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CIMG_06089
Coccidioides immitis
CIMG_06089
D
ANIA_00885
Aspergillus nidulans
CADANIAG00001772
D
AUEXF2481DRAFT_1146
Aureobasidium subglaciale
AUEXF2481DRAFT_1146
I
CADAFLAG00001182
Aspergillus flavus
CADAFLAG00001182
I
CADANGAG00001377
Aspergillus niger
CADANGAG00001377
I
CPC735_026550
Coccidioides posadasii
CPC735_026550
I
VHEMI00625
Torrubiella hemipterigena
VHEMI00625
I
fgenesh1_pm.00042_#_331
Aspergillus carbonarius
fgenesh1_pm.00042_#_331
I
SNOG_10151
Stagonospora nodorum
SNOG_10151
N
COCC4DRAFT_149555
Bipolaris maydis
COCC4DRAFT_149555
N
COCMIDRAFT_87622
Bipolaris oryzae
COCMIDRAFT_87622
N
PTRG_02110
Pyrenophora triticirepentis
PTRG_02110
N
SNOG_10151
Phaeosphaeria nodorum
SNOG_10151
N
estExt_Genewise1Plus.C_220030
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_220030
N