CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.010G048800
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.010G048800
T202659_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.010G048800.1
GRAS
98
478
LIHLLMAAAEALAGDNKSRELARVILVRLKELVSHNDGTNMERLAAYFTEALHGLLEGSGGGHGKHLITNGPHHHGDEHHHTDMLAAFQLLQDMSPYVKFGHFTANQAILEATTHDRRIHIVDYDVMEGIQWASLMQALVSRKDGPQAPHLRITAISRTGSGRRSIGTIQETGRRLVAFAASIGQPFSFHQCRLDSDETFRPSALKLVRGEALIINCMLHLPHFSYRAPDSVASFLSGAKTLNPRLVTLVEEEVGPIGDGGFVGQFMDSLHHYSAVYDSLEAGFPMQNRARALVERVFLGPRIAGSLARIYRTGGEEESCGWSKWLATMGFKPVNISFANHCQAKLLLGLFNDGYRVEELANNRLVLGWKSRRLLSASIWT
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA01G40600
Glycine max
GLYMA01G40600
I
GLYMA11G04681
Glycine max
GLYMA11G04681
I
MTR_5g014640
Medicago truncatula
MTR_5g014640
I
Ca_22309
Cicer arietinum
Ca_22309
I
MDP0000124672
Malus domestica
MDP0000124672
I
Pavir.J27306
Panicum virgatum
Pavir.J27306
I
chr2.CM0021.430.nc
Lotus japonicus
chr2.CM0021.430.nc
I
GLYMA03G25280
Glycine max
GLYMA03G25280
N