CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g011012m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g011012m.g
T202936_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g011012m
GRAS
107
488
LVHLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALSRGGSGRRSISTVQETGRRLVAFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSLARIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFNDGYRVEELANNRLVLGWKSRRLLSASVWT
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF711
Anolis carolinensis
ENSACAG00000014034
N
ENSAPLG00000007311
Anas platyrhynchos
ENSAPLG00000007311
N
ENSFALG00000004005
Ficedula albicollis
ENSFALG00000004005
N
ZNF711
Monodelphis domestica
ENSMODG00000014346
N
ENSPSIG00000003246
Pelodiscus sinensis
ENSPSIG00000003246
N
ZNF711
Taeniopygia guttata
ENSTGUG00000002466
N
Aan_R004750
Calypte anna
Aan_R004750
N
Afo_R014155
Aptenodytes forsteri
Afo_R014155
N
Alligator_sinensis_CCG016799.1
Alligator sinensis
Alligator_sinensis_CCG016799.1
N
Gfo_R008521
Geospiza fortis
Gfo_R008521
N
Ogr04055
Ophisaurus gracilis
Ogr04055
N
Pvit_08921
Pogona vitticeps
Pvit_08921
N
Tal_R004476
Tyto alba
Tal_R004476
N