chr2.CM0018.90.nc (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr2.CM0018.90.nc T203272_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0018.90.nc GRAS 49 471

Links

Other GRAS family TFs
Other Lotus japonicus TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10024177.g Linum usitatissimum Lus10024177.g N
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.756
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.810
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.751
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.773
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.721
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.749
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.811
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.847
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.753
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.730
Lus10019773.g Linum usitatissimum Lus10019773.g N
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.730
Lus10039562.g Linum usitatissimum Lus10039562.g N
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.754
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.813
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.738
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.797
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.766
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.727
PK02707.1 Cannabis sativa PK02707.1 N 0.737
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.879
PDK_20s1303935g001 Phoenix dactylifera PDK_20s1303935g001 N
Ca_11133 Cicer arietinum Ca_11133 N 0.860
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.803
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.763
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.741
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.805
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.815
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.721
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.797
TCM_040833 Theobroma cacao TCM_040833 N 0.844
TCM_042392 Theobroma cacao TCM_042392 N 0.760
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.811
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.763
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.915
Ca_27441 Cicer arietinum Ca_27441 N 0.910
Cla020893 Citrullus lanatus Cla020893 N 0.715
Pm012190 Prunus mume Pm012190 N 0.817
Pm029840 Prunus mume Pm029840 N 0.721
30024.m001746 Ricinus communis 30024.m001746 N 0.805
30131.m007244 Ricinus communis 30131.m007244 N 0.766
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.766
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.766
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.786
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.741
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.790