CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE27228
(
Caenorhabditis remanei
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CRE27228
T206304_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE27228
Homeodomain
280
333
FQLTPAERQMLCRYWNSGNRHVTASECMLLSRRCPSLAPHQVYGFFDKRRRRTY
CRE27228
Homeodomain
377
431
QREILSKEDTAKLEVLWQLGHRKPSRNECELLAADLYIESGEQIFAYFEDRRWHD
Links
Other
Homeodomain
family TFs
Other
Caenorhabditis remanei
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH47
Arabidopsis thaliana
AT3G47640
N
PYE
Arabidopsis lyrata
fgenesh2_kg.5__1121__AT3G47640.1
N
POPTR_0003s07200
Populus trichocarpa
POPTR_0003s07200
N
PRUPE_ppa010295mg
Prunus persica
PRUPE_ppa010295mg
N
Pm024772
Prunus mume
Pm024772
N
cassava17541.valid.m1
Manihot esculenta
cassava17541.valid.m1
N
Bostr.18473s0193
Boechera stricta
Bostr.18473s0193
N
Cagra.1659s0007
Capsella grandiflora
Cagra.1659s0007
N
Carubv10017931m.g
Capsella rubella
Carubv10017931m.g
N
Eucgr.B00470
Eucalyptus grandis
Eucgr.B00470
N
Gorai.007G036700
Gossypium raimondii
Gorai.007G036700
N
Thhalv10010670m.g
Eutrema salsugineum
Thhalv10010670m.g
N
PK09009.1
Cannabis sativa
PK09009.1
N