OTX2 (Choloepus hoffmanni)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCHOG00000013827 T207806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRX
M00274_2.00 		Homo sapiens
NMTAATCCSN
NSGGATTAKN		 PBM
Barrera et al.(2016)
CRX_REF 		0.449 1.000
Otx1
M00396_2.00 		Mus musculus
NTAAKCYN
NRGMTTAN		 PBM
Berger et al.(2008)
Otx1_2325 		0.449 1.000
Otx2
M00418_2.00 		Mus musculus
NTAAKMBN
NVKMTTAN		 PBM
Berger et al.(2008)
Otx2_3441 		0.449 1.000
Crx
M00489_2.00 		Mus musculus
NWAAKMBN
NVKMTTWN		 PBM
Berger et al.(2008)
Crx_3485 		0.449 1.000
OTX1
M03116_2.00 		Homo sapiens
NNTAAKCGGATTANN
NNTAATCCGMTTANN		 SELEX
Jolma et al.(2013)
OTX1_1 		0.449 1.000
OTX1
M03117_2.00 		Homo sapiens
NTAATCSB
VSGATTAN		 SELEX
Jolma et al.(2013)
OTX1_2 		0.449 1.000
OTX2
M03197_2.00 		Homo sapiens
NHTAAKCGGATTANN
NNTAATCCGMTTADN		 SELEX
Jolma et al.(2013)
OTX2_1 		0.449 1.000
OTX2
M03198_2.00 		Homo sapiens
HTAATCCB
VGGATTAD		 SELEX
Jolma et al.(2013)
OTX2_2 		0.449 1.000
Otx1
M03249_2.00 		Mus musculus
NNTAAKCGGATTANN
NNTAATCCGMTTANN		 SELEX
Jolma et al.(2013)
Otx1_1 		0.449 1.000
Otx1
M03250_2.00 		Mus musculus
NTAATCCN
NGGATTAN		 SELEX
Jolma et al.(2013)
Otx1_2 		0.449 1.000
oc
M03808_2.00 		Drosophila melanogaster
HTAATCCB
VGGATTAD		 SELEX
Nitta et al.(2015)
oc_1 		0.449 1.000
CRX
M04949_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
CRX_FL_HT-SELEX 		0.449 1.000
OTX1
M05022_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX1_eDBD_HT-SELEX 		0.449 1.000
OTX1
M05024_2.00 		Homo sapiens
NTAATCCNNN
NNNGGATTAN		 SELEX
Yin et al.(2017)
OTX1_FL_HT-SELEX 		0.449 1.000
OTX2
M05251_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX2_FL_HT-SELEX 		0.449 1.000
oc
M06502_2.00 		Drosophila melanogaster
TAATCC
GGATTA		 B1H
Mathelier et al.(2014)
MA0234.1 		0.449 1.000
oc
M06282_2.00 		Drosophila melanogaster
WTAATCC
GGATTAW		 B1H
Zhu et al.(2011)
Oc_Cell_FBgn0004102 		0.449 1.000
oc
M06283_2.00 		Drosophila melanogaster
NTAATCCB
VGGATTAN		 B1H
Zhu et al.(2011)
Oc_SOLEXA_FBgn0004102 		0.449 1.000
Crx
M08139_2.00 		Mus musculus
YTAATCCYCYY
RRGRGGATTAR		 ChIP-seq
Mathelier et al.(2014)
MA0467.1 		0.449 1.000
CRX
M09132_2.00 		Homo sapiens
BYTAATCCBHYYN
NRRDVGGATTARV		 Misc
Kulakovskiy et al.(2013)
CRX_HUMAN.H11MO.0.B 		0.449 1.000
OTX2
M09153_2.00 		Homo sapiens
BYTAATCCYYN
NRRGGATTARV		 Misc
Kulakovskiy et al.(2013)
OTX2_HUMAN.H11MO.0.A 		0.449 1.000
Crx
M09208_2.00 		Mus musculus
BYTAATCCBHYYN
NRRDVGGATTARV		 Misc
Kulakovskiy et al.(2013)
CRX_MOUSE.H11MO.0.A 		0.449 1.000
Otx2
M09183_2.00 		Mus musculus
HTAATCCYNYNN
NNRNRGGATTAD		 Misc
Kulakovskiy et al.(2013)
OTX2_MOUSE.H11MO.0.A 		0.449 1.000
Crx
M09577_2.00 		Mus musculus
NYTAATCC
GGATTARN		 Misc
Heinz et al.(2010)
Retina-Crx_GSE20012 		0.449 1.000
Otx2
M09569_2.00 		Mus musculus
NHTAATCCHB
VDGGATTADN		 Misc
Heinz et al.(2010)
EpiLC-Otx2_GSE56098 		0.449 1.000
oc
M09681_2.00 		Drosophila melanogaster
HTAATCCN
NGGATTAD		 Misc
Kulakovskiy et al.(2009)
oc 		0.449 1.000
CRX
M10647_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CRX_Q4_01 		0.449 1.000
CRX
M10648_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CRX_Q4_02 		0.449 1.000
OTX1
M10673_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OTX1_Q5 		0.449 1.000
OTX2
M10727_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OTX2_Q3_01 		0.449 1.000
OTX2
M10728_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OTX2_Q3 		0.449 1.000
CRX
M00271_2.00 		Homo sapiens
NHDAKNN
NNMTHDN		 PBM
Barrera et al.(2016)
CRX_R41Q 		0.449 1.000
CRX
M00272_2.00 		Homo sapiens
NNHNATNN
NNATNDNN		 PBM
Barrera et al.(2016)
CRX_R41W 		0.449 1.000
CRX
M00275_2.00 		Homo sapiens
NMTAATCCSN
NSGGATTAKN		 PBM
Barrera et al.(2016)
CRX_V66I 		0.449 1.000
CRX
M04950_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
CRX_FL_Methyl-HT-SELEX 		0.449 1.000
OTX1
M05023_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX1_eDBD_Methyl-HT-SELEX 		0.449 1.000
OTX1
M05025_2.00 		Homo sapiens
HTAATCCNHN
NDNGGATTAD		 SELEX
Yin et al.(2017)
OTX1_FL_Methyl-HT-SELEX 		0.449 1.000
OTX2
M05252_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX2_FL_Methyl-HT-SELEX 		0.449 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000012238 Homeodomain 2 25
ENSCHOP00000012247 Homeodomain 2 25

Links

Other Homeodomain family TFs
Other Choloepus hoffmanni TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CaO19.12407 Candida albicans CaO19.12407 N
CaO19.4941 Candida albicans CaO19.4941 N
CD36_12210 Candida dubliniensis CD36_12210 N