irx5a (Danio rerio)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSDARG00000034043 T208586_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000043856 Homeodomain 112 171

Links

Other Homeodomain family TFs
Other Danio rerio TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG43689 Drosophila melanogaster FBgn0263772 I 0.000
AFUN000252 Anopheles funestus AFUN000252 N 0.000
tetur15g00740 Tetranychus urticae tetur15g00740 N 0.000
ENSBTAP00000004603-D1 Bos grunniens ENSBTAP00000004603-D1 N 0.000
Hsal_01303--XP_394358.3_APIME Harpegnathos saltator Hsal_01303--XP_394358.3_APIME N 0.000
LDEC007508 Leptinotarsa decemlineata LDEC007508 N 0.000
AARA002561 Anopheles arabiensis AARA002561 N 0.000
ACHR008455 Anopheles christyi ACHR008455 N 0.000
ACUA023712 Anopheles culicifacies ACUA023712 N 0.000
ADIR004650 Anopheles dirus ADIR004650 N 0.000
AEPI011200 Anopheles epiroticus AEPI011200 N 0.000
SINV15347 Solenopsis invicta SINV15347 N 0.000
AMEC011182 Anopheles melas AMEC011182 N 0.000
AMEM010335 Anopheles merus AMEM010335 N 0.000
AMIN005800 Anopheles minimus AMIN005800 N 0.000
AQUA002448 Anopheles quadriannulatus AQUA002448 N 0.000
ASIS023610 Anopheles sinensis ASIS023610 N 0.000
ASTEI01189 Anopheles stephensi ASTEI01189 N 0.000
D917_04267 Trichinella nativa D917_04267 N 0.000
D918_01045 Trichuris suis D918_01045 N 0.000
TMUE_s0020007600 Trichuris muris TMUE_s0020007600 N 0.000
ENSPMAG00000001124 Petromyzon marinus ENSPMAG00000001124 N 0.000
AAEL001230 Aedes aegypti AAEL001230 N 0.000
CGI_10022679 Crassostrea gigas CGI_10022679 N 0.000
CPIJ011292 Culex quinquefasciatus CPIJ011292 N 0.000
ci-mytf Ciona intestinalis ENSCING00000007794 N 0.000
ST18 Callithrix jacchus ENSCJAG00000014630 N 0.000
ENSCSAVG00000009233 Ciona savignyi ENSCSAVG00000009233 N 0.000
ENSGMOG00000000679 Gadus morhua ENSGMOG00000000679 N 0.000
ENSMEUG00000001386 Macropus eugenii ENSMEUG00000001386 N 0.000
ENSOARG00000005304 Ovis aries ENSOARG00000005304 N 0.000
CpipJ_CPIJ011292 Culex pipiens CpipJ_CPIJ011292 N 0.000
MYT1L Pteropus vampyrus ENSPVAG00000001625 N 0.000
MYT1L Tetraodon nigroviridis ENSTNIG00000008296 N 0.000
MYT1 Takifugu rubripes ENSTRUG00000002124 N 0.000
GF20773 Drosophila ananassae FBgn0097779 N 0.000
GK10260 Drosophila willistoni FBgn0212275 N 0.000
HMEL002385 Heliconius melpomene HMEL002385 N 0.000
MCINX013435 Melitaea cinxia MCINX013435 N 0.000
NV11201 Nasonia vitripennis NV11201 N 0.000