ENSLACG00000001487 (Latimeria chalumnae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSLACG00000001487 T210763_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.699 0.304
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.699 0.304
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.699 0.304
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.699 0.304
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.656 0.413
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000001663 Homeodomain 174 195
ENSLACP00000001663 Homeodomain 191 214

Links

Other Homeodomain family TFs
Other Latimeria chalumnae TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PaG_03487 Pseudozyma aphidis PaG_03487 N
PAN0_012c4580 Pseudozyma antarctica PAN0_012c4580 N
PFL1_05776 Pseudozyma flocculosa PFL1_05776 N
PGTG_11136 Puccinia graminis PGTG_11136 N
PSEUBRA_SCAF11g01209 Pseudozyma brasiliensis PSEUBRA_SCAF11g01209 N
RHTO_02680 Rhodosporidium toruloides RHTO_02680 N
RTG_01581 Rhodotorula glutinis RTG_01581 N
sr15356 Sporisorium reilianum sr15356 N
UHOR_06975 Ustilago hordei UHOR_06975 N