CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

SIX3 *(Monodelphis domestica)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSMODG00000000753	T212053_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Six3 M00483_2.00	Mus musculus	NNNAYMN	NKRTNNN	PBM Berger et al.(2008) Six3_1732	0.867	1.000
SIX3 M05159_2.00	Homo sapiens	NNYGATABBN	NVVTATCRNN	SELEX Yin et al.(2017) SIX3_eDBD_HT-SELEX	0.867	1.000
SIX3 M10698_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SIX3_Q6	0.867	1.000
SIX3 M05160_2.00	Homo sapiens	NNYGATABVB	VBVTATCRNN	SELEX Yin et al.(2017) SIX3_eDBD_Methyl-HT-SELEX	0.867	1.000
Optix M02124_2.00	Drosophila melanogaster	NNNNNDATMN	NKATHNNNNN	PBM Weirauch et al.(2014) pTH5437	0.867	0.947
Optix M03850_2.00	Drosophila melanogaster	TAATYTAATTA	TAATTARATTA	SELEX Nitta et al.(2015) Optix_1	0.867	0.947
Optix M06526_2.00	Drosophila melanogaster	TGATA	TATCA	B1H Mathelier et al.(2014) MA0199.1	0.867	0.947
Optix M06327_2.00	Drosophila melanogaster	HHVTGATA	TATCABDD	B1H Zhu et al.(2011) Optix_Cell_FBgn0025360	0.867	0.947
Optix M06328_2.00	Drosophila melanogaster	NNNTGATA	TATCANNN	B1H Zhu et al.(2011) Optix_SOLEXA_FBgn0025360	0.867	0.947
SIX6 M00326_2.00	Homo sapiens	NNDATMB	VKATHNN	PBM Barrera et al.(2016) SIX6_REF	0.865	0.982
Six6 M00169_2.00	Mus musculus	NNAYMNN	NNKRTNN	PBM Badis et al.(2009) Six6_2267	0.865	0.982
Six6 M00412_2.00	Mus musculus	NNNTGATAYCN	NGRTATCANNN	PBM Berger et al.(2008) Six6_2267	0.865	0.982
SIX6 M05357_2.00	Homo sapiens	NNYGATASVB	VBSTATCRNN	SELEX Yin et al.(2017) SIX6_eDBD_HT-SELEX	0.865	0.982
SIX6 M00325_2.00	Homo sapiens	NNNDATMB	VKATHNNN	PBM Barrera et al.(2016) SIX6_H141N	0.865	0.982
SIX6 M05358_2.00	Homo sapiens	VBVYAYCRNN	NNYGRTRBVB	SELEX Yin et al.(2017) SIX6_eDBD_Methyl-HT-SELEX	0.865	0.982
six3 M02102_2.00	Oryzias latipes	NNDAYMBNNN	NNNVKRTHNN	PBM Weirauch et al.(2014) pTH5928	0.865	0.947
SIX6 M00327_2.00	Homo sapiens	NHDAYMBNN	NNVKRTHDN	PBM Barrera et al.(2016) SIX6_T165A	0.859	0.965
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSMODP00000000902	Homeodomain	208	264	EQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRA

Links
Other Homeodomain family TFs
Other *Monodelphis domestica* TFs

296 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
DRE_06964	Drechslerella stenobrocha	DRE_06964	I	0.000
SNOG_08309	Phaeosphaeria nodorum	SNOG_08309	I	0.000
CIMG_08549	Coccidioides immitis	CIMG_08549	N	0.000
MCYG_02334	Microsporum canis	MCYG_02334	N	0.000
SNOG_08309	Stagonospora nodorum	SNOG_08309	N	0.000
VDBG_05547	Verticillium albo atrum	VDBG_05547	N	0.000
ACRE_057790	Acremonium chrysogenum	ACRE_057790	N	0.000
AOL_s00043g47	Arthrobotrys oligospora	AOL_s00043g47	N	0.000
ARB_06070	Arthroderma benhamiae	ARB_06070	N	0.000
BAUCODRAFT_151200	Baudoinia compniacensis	BAUCODRAFT_151200	N	0.000
BBA_04216	Beauveria bassiana	BBA_04216	N	0.000
BDDG_07871	Blastomyces dermatitidis	BDDG_07871	N	0.000
BGHDH14_bgh06000	Blumeria graminis	BGHDH14_bgh06000	N	0.000
CADAFLAG00013433	Aspergillus flavus	CADAFLAG00013433	N	0.000
AFUA_4G04502	Aspergillus fumigatus	CADAFUAG00001430	N	0.000
CADANGAG00010969	Aspergillus niger	CADANGAG00010969	N	0.000
CADAORAG00012206	Aspergillus oryzae	CADAORAG00012206	N	0.000
NFIA_028860	Neosartorya fischeri	CADNFIAG00002767	N	0.000
CFIO01_04547	Colletotrichum fioriniae	CFIO01_04547	N	0.000
CGGC5_1651	Colletotrichum gloeosporioides	CGGC5_1651	N	0.000
CH063_04335	Colletotrichum higginsianum	CH063_04335	N	0.000
CMQ_3588	Grosmannia clavigera	CMQ_3588	N	0.000
Cob_03924	Colletotrichum orbiculare	Cob_03924	N	0.000
COCC4DRAFT_137933	Bipolaris maydis	COCC4DRAFT_137933	N	0.000
COCCADRAFT_23204	Bipolaris zeicola	COCCADRAFT_23204	N	0.000
COCMIDRAFT_90826	Bipolaris oryzae	COCMIDRAFT_90826	N	0.000
COCSADRAFT_237465	Bipolaris sorokiniana	COCSADRAFT_237465	N	0.000
COCVIDRAFT_100540	Bipolaris victoriae	COCVIDRAFT_100540	N	0.000
CPC735_062070	Coccidioides posadasii	CPC735_062070	N	0.000
CPUR_00409	Claviceps purpurea	CPUR_00409	N	0.000
CSUB01_10826	Colletotrichum sublineola	CSUB01_10826	N	0.000
DOTSEDRAFT_73714	Dothistroma septosporum	DOTSEDRAFT_73714	N	0.000
EPUS_01915	Endocarpon pusillum	EPUS_01915	N	0.000
EURHEDRAFT_462177	Aspergillus ruber	EURHEDRAFT_462177	N	0.000
EV44_g0556	Erysiphe necator	EV44_g0556	N	0.000
F503_06440	Ophiostoma piceae uamh	F503_06440	N	0.000
FFUJ_08331	Fusarium fujikuroi	FFUJ_08331	N	0.000
FGRRES_10868	Fusarium graminearum	FGRRES_10868	N	0.000
FOXG_12803	Fusarium oxysporum	FOXG_12803	N	0.000
FPSE_09836	Fusarium pseudograminearum	FPSE_09836	N	0.000
FVEG_11544	Fusarium verticillioides	FVEG_11544	N	0.000
GGTG_10719	Gaeumannomyces graminis	GGTG_10719	N	0.000
GLRG_05271	Colletotrichum graminicola	GLRG_05271	N	0.000
GMDG_00035	Pseudogymnoascus destructans	GMDG_00035	N	0.000
GSTUM_00004466001	Tuber melanosporum	GSTUM_00004466001	N	0.000
H072_3239	Dactylellina haptotyla	H072_3239	N	0.000
H101_00214	Trichophyton interdigitale	H101_00214	N	0.000
HCBG_08291	Histoplasma capsulatum	HCBG_08291	N	0.000
HMPREF1624_03486	Sporothrix schenckii	HMPREF1624_03486	N	0.000
LEMA_P076740.1	Leptosphaeria maculans	LEMA_P076740.1	N	0.000
MAJ_01594	Metarhizium majus	MAJ_01594	N	0.000
MAM_02919	Metarhizium album	MAM_02919	N	0.000
MANI_027126	Metarhizium anisopliae	MANI_027126	N	0.000
MAPG_00013	Magnaporthe poae	MAPG_00013	N	0.000
MBM_05529	Marssonina brunnea	MBM_05529	N	0.000
MBR_04590	Metarhizium brunneum	MBR_04590	N	0.000
MGG_06971	Magnaporthe oryzae	MGG_06971	N	0.000
MGU_04157	Metarhizium guizhouense	MGU_04157	N	0.000
MGYG_07335	Microsporum gypseum	MGYG_07335	N	0.000
MPH_02552	Macrophomina phaseolina	MPH_02552	N	0.000
MYCFIDRAFT_146678	Pseudocercospora fijiensis	MYCFIDRAFT_146678	N	0.000
Mycgr3G38379	Zymoseptoria tritici	Mycgr3G38379	N	0.000
NechaG40194	Fusarium solani	NechaG40194	N	0.000
OCS_04575	Ophiocordyceps sinensis	OCS_04575	N	0.000
OIDMADRAFT_181379	Oidiodendron maius	OIDMADRAFT_181379	N	0.000
PAAG_01459	Paracoccidioides sp lutzii	PAAG_01459	N	0.000
PABG_01939	Paracoccidioides brasiliensis	PABG_01939	N	0.000
PCH_Pc13g06670	Penicillium rubens	PCH_Pc13g06670	N	0.000
PDE_05764	Penicillium oxalicum	PDE_05764	N	0.000
PDIP_15740	Penicillium digitatum	PDIP_15740	N	0.000
PEX1_020890	Penicillium expansum	PEX1_020890	N	0.000
PMAA_085950	Talaromyces marneffei	PMAA_085950	N	0.000
PTRG_08428	Pyrenophora triticirepentis	PTRG_08428	N	0.000
PTT_06554	Pyrenophora teres	PTT_06554	N	0.000
PV09_01119	Verruconis gallopava	PV09_01119	N	0.000
PVAR5_3532	Byssochlamys spectabilis	PVAR5_3532	N	0.000
S40285_02996	Stachybotrys chlorohalonata	S40285_02996	N	0.000
S40288_00568	Stachybotrys chartarum	S40288_00568	N	0.000
SBOR_3380	Sclerotinia borealis	SBOR_3380	N	0.000
SEPMUDRAFT_47596	Sphaerulina musiva	SEPMUDRAFT_47596	N	0.000
SETTUDRAFT_34274	Setosphaeria turcica	SETTUDRAFT_34274	N	0.000
SMAC_00003	Sordaria macrospora	SMAC_00003	N	0.000
SS1G_01646	Sclerotinia sclerotiorum	SS1G_01646	N	0.000
TEQG_06289	Trichophyton equinum	TEQG_06289	N	0.000
TESG_06359	Trichophyton tonsurans	TESG_06359	N	0.000
TRIATDRAFT_174226	Trichoderma atroviride	TRIATDRAFT_174226	N	0.000
TRIREDRAFT_27357	Trichoderma reesei	TRIREDRAFT_27357	N	0.000
TRIVIDRAFT_125026	Trichoderma virens	TRIVIDRAFT_125026	N	0.000
TRV_00290	Trichophyton verrucosum	TRV_00290	N	0.000
TSTA_121070	Talaromyces stipitatus	TSTA_121070	N	0.000
U727_0043017041	Penicillium solitum	U727_0043017041	N	0.000
UCREL1_4627	Eutypa lata	UCREL1_4627	N	0.000
UCRPA7_905	Togninia minima	UCRPA7_905	N	0.000
UV8b_4500	Ustilaginoidea virens	UV8b_4500	N	0.000
V499_07683	Pseudogymnoascus pannorum	V499_07683	N	0.000
VDAG_07492	Verticillium dahliae	VDAG_07492	N	0.000
VDBG_05547	Verticillium alfalfae	VDBG_05547	N	0.000
VHEMI09490	Torrubiella hemipterigena	VHEMI09490	N	0.000
W97_04615	Coniosporium apollinis	W97_04615	N	0.000
X797_007282	Metarhizium robertsii	X797_007282	N	0.000
e_gw1.12.536.1	Nectria haematococca	e_gw1.12.536.1	N	0.000
e_gw1.3.1300.1	Mycosphaerella graminicola	e_gw1.3.1300.1	N	0.000
estExt_fgenesh2_pg.C_100130	Neurospora discreta	estExt_fgenesh2_pg.C_100130	N	0.000
estExt_Genewise1Plus.C_50691	Cochliobolus heterostrophus C5	estExt_Genewise1Plus.C_50691	N	0.000
gw1.18.319.1	Mycosphaerella fijiensis	gw1.18.319.1	N	0.000
hsf-2	Neurospora crassa	NCU08480	N	0.000
Pc13g06670	Penicillium chrysogenum	Pc13g06670	N	0.000
PMAA_085950	Penicillium marneffei	PMAA_085950	N	0.000

SIX3 (Monodelphis domestica) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

296 Related TFs

SIX3 **(Monodelphis domestica)
Homeodomain**