IRX5 (Ochotona princeps)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOPRG00000003007 T213701_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000002753 Homeodomain 31 90

Links

Other Homeodomain family TFs
Other Ochotona princeps TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WER Arabidopsis thaliana AT5G14750 D 0.000
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.000
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.000
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.000
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.000
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.000
MDP0000650225 Malus domestica MDP0000650225 I 0.000
MDP0000578193 Malus domestica MDP0000578193 I 0.000
MDP0000537324 Malus domestica MDP0000537324 I 0.000
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.000
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.000
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I 0.000
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.000
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.000
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.000
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.000
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.000
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.000
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.000
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.000
Pm024725 Prunus mume Pm024725 I 0.000
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.000
TCM_016886 Theobroma cacao TCM_016886 I 0.000
TCM_012057 Theobroma cacao TCM_012057 I 0.000
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.000
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.000
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.000
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.000
Bo2g012170 Brassica oleracea Bo2g012170 I 0.000