IRX2 (Ochotona princeps)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOPRG00000012917 T213785_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000011786 Homeodomain 114 173

Links

Other Homeodomain family TFs
Other Ochotona princeps TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA01G32890 Glycine max GLYMA01G32890 I 0.000
GLYMA03G32747 Glycine max GLYMA03G32747 I 0.000
Traes_7DS_0536E73E5 Triticum aestivum Traes_7DS_0536E73E5 I 0.000
GRMZM2G030744 Zea mays GRMZM2G030744 I 0.000
MLOC_10815 Hordeum vulgare MLOC_10815 I 0.000
Traes_7BS_F67ED5C9E Triticum aestivum Traes_7BS_F67ED5C9E I 0.000
MLOC_77331 Hordeum vulgare MLOC_77331 I 0.000
OB06G13990 Oryza brachyantha OB06G13990 I 0.000
OLONG_014962 Oryza longistaminata OLONG_014962 I 0.000
Thhalv10017520m.g Eutrema salsugineum Thhalv10017520m.g N 0.000
BGIOSGA009202 Oryza indica BGIOSGA009202 N 0.000
Traes_6DL_C8198CD4A Triticum aestivum Traes_6DL_C8198CD4A N 0.000
Traes_6AL_842E10085 Triticum aestivum Traes_6AL_842E10085 N 0.000
Traes_5AL_85F3BE385 Triticum aestivum Traes_5AL_85F3BE385 N 0.000
Sb01g029220 Sorghum bicolor Sb01g029220 N 0.000
PGSC0003DMG400024523 Solanum tuberosum PGSC0003DMG400024523 N 0.000
OMERI10G14830 Oryza meridionalis OMERI10G14830 N 0.000
OLONG_024366 Oryza longistaminata OLONG_024366 N 0.000
OLONG_008764 Oryza longistaminata OLONG_008764 N 0.000
OB03G34880 Oryza brachyantha OB03G34880 N 0.000
MLOC_49032 Hordeum vulgare MLOC_49032 N 0.000
GLYMA06G22790 Glycine max GLYMA06G22790 N 0.000
GLYMA02G00981 Glycine max GLYMA02G00981 N 0.000