CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OCP3
(
Arabidopsis lyrata
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
fgenesh2_kg.6__1093__AT5G11270.1
T218475_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.6__1093__AT5G11270.1
Homeodomain
286
339
SAQKRVKKAHIETLEKVYRRSKRPTNAVVSSIVQVTNLPRKRVLKWFEDKRAED
Links
Other
Homeodomain
family TFs
Other
Arabidopsis lyrata
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TGA1A
Nicotiana sp.
TGA1A_TOBAC
D
TGA1A_TOBAC
Nicotiana tabacum
TGA1A_TOBAC
D
PGSC0003DMG400012792
Solanum tuberosum
PGSC0003DMG400012792
I
Solyc04g054320.2
Solanum lycopersicum
Solyc04g054320.2
I
GLYMA11G36010
Glycine max
GLYMA11G36010
N
GLYMA18G02430
Glycine max
GLYMA18G02430
N
Ca_12670
Cicer arietinum
Ca_12670
N
LjT15A14.110.nd
Lotus japonicus
LjT15A14.110.nd
N