MLOC_61603 (Hordeum vulgare)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MLOC_61603 T220705_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.849 0.929
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.849 0.929
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.849 0.929
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.844 0.857
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.844 0.857
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_61603.1 Homeodomain 31 90
MLOC_61603.2 Homeodomain 31 90
MLOC_61603.3 Homeodomain 31 90
MLOC_61603.4 Homeodomain 31 90

Links

Other Homeodomain family TFs
Other Hordeum vulgare TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCRT2 Homo sapiens ENSG00000215397 D
SCRT1 Homo sapiens ENSG00000261678 D
scrt Drosophila melanogaster FBgn0004880 D
CG12605 Drosophila melanogaster FBgn0035481 D
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I
AAEL005176 Aedes aegypti AAEL005176 I
AAEL009230 Aedes aegypti AAEL009230 I
AAEL014359 Aedes aegypti AAEL014359 I
ACYPI34938 Acyrthosiphon pisum ACYPI34938 I
AGAP006791 Anopheles gambiae AGAP006791 I
AGAP006794 Anopheles gambiae AGAP006794 I
BGIBMGA000604 Bombyx mori BGIBMGA000604 I
BGIBMGA000607 Bombyx mori BGIBMGA000607 I
CapteG149623 Capitella teleta CapteG149623 I
CapteG176021 Capitella teleta CapteG176021 I
CapteG223614 Capitella teleta CapteG223614 I
CapteG76620 Capitella teleta CapteG76620 I
CGI_10023711 Crassostrea gigas CGI_10023711 I
CPIJ004535 Culex quinquefasciatus CPIJ004535 I
CPIJ017517 Culex quinquefasciatus CPIJ017517 I
DAPPUDRAFT_14328 Daphnia pulex DAPPUDRAFT_14328 I
EFV52761 Trichinella spiralis EFV52761 I
SCRT2 Anolis carolinensis ENSACAG00000016109 I
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I
ENSAMXG00000018604 Astyanax mexicanus ENSAMXG00000018604 I
ENSAMXG00000018733 Astyanax mexicanus ENSAMXG00000018733 I
ENSAPLG00000011730 Anas platyrhynchos ENSAPLG00000011730 I
SCRT1 Bos taurus ENSBTAG00000046208 I
SCRT2 Callithrix jacchus ENSCJAG00000020870 I
SCRT1 Callithrix jacchus ENSCJAG00000021406 I
SCRT2 Cavia porcellus ENSCPOG00000008447 I
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I
ENSCSAG00000010473 Chlorocebus sabaeus ENSCSAG00000010473 I
scrt1b Danio rerio ENSDARG00000040214 I
scrt2 Danio rerio ENSDARG00000056175 I
scrt1a Danio rerio ENSDARG00000100821 I
SCRT2 Dasypus novemcinctus ENSDNOG00000002583 I
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I
ENSFALG00000005718 Ficedula albicollis ENSFALG00000005718 I
SCRT2 Felis catus ENSFCAG00000010922 I
SCRT1 Gasterosteus aculeatus ENSGACG00000004072 I
scrt1b Gasterosteus aculeatus ENSGACG00000008982 I
scrt2 Gasterosteus aculeatus ENSGACG00000011802 I
SCRT2 Gallus gallus ENSGALG00000028912 I
SCRT1 Gorilla gorilla ENSGGOG00000013612 I
ENSGGOG00000015228 Gorilla gorilla ENSGGOG00000015228 I
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I
ENSGMOG00000019519 Gadus morhua ENSGMOG00000019519 I
ENSLACG00000003588 Latimeria chalumnae ENSLACG00000003588 I
SCRT2 Loxodonta africana ENSLAFG00000030340 I
SCRT1 Loxodonta africana ENSLAFG00000031587 I
ENSLOCG00000002246 Lepisosteus oculatus ENSLOCG00000002246 I
ENSLOCG00000007573 Lepisosteus oculatus ENSLOCG00000007573 I
ENSMEUG00000009675 Macropus eugenii ENSMEUG00000009675 I
SCRT2 Meleagris gallopavo ENSMGAG00000016579 I
ENSMMUG00000017354 Macaca mulatta ENSMMUG00000017354 I
SCRT1 Macaca mulatta ENSMMUG00000028886 I
SCRT2 Monodelphis domestica ENSMODG00000019528 I
Scrt1 Mus musculus ENSMUSG00000048385 I
Scrt2 Mus musculus ENSMUSG00000060257 I
ENSNLEG00000009420 Nomascus leucogenys ENSNLEG00000009420 I
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I
SCRT1 Otolemur garnettii ENSOGAG00000026538 I
SCRT2 Otolemur garnettii ENSOGAG00000031187 I
ENSONIG00000003152 Oreochromis niloticus ENSONIG00000003152 I
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I
ENSONIG00000016758 Oreochromis niloticus ENSONIG00000016758 I
ENSONIG00000019809 Oreochromis niloticus ENSONIG00000019809 I
scrt1b Oryzias latipes ENSORLG00000008641 I
scrt2 Oryzias latipes ENSORLG00000015072 I
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I
ENSPFOG00000005616 Poecilia formosa ENSPFOG00000005616 I
ENSPFOG00000007738 Poecilia formosa ENSPFOG00000007738 I
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I
Scrt2 Rattus norvegicus ENSRNOG00000005148 I
Scrt1 Rattus norvegicus ENSRNOG00000025594 I
ENSSHAG00000001992 Sarcophilus harrisii ENSSHAG00000001992 I
SCRT1 Sus scrofa ENSSSCG00000025879 I
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I
SCRT2 Taeniopygia guttata ENSTGUG00000006801 I
scrt2 Tetraodon nigroviridis ENSTNIG00000012473 I
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I
scrt2 Takifugu rubripes ENSTRUG00000007620 I
scrt1b Takifugu rubripes ENSTRUG00000011637 I
SCRT1 Takifugu rubripes ENSTRUG00000012719 I
SCRT2 Tursiops truncatus ENSTTRG00000007039 I
ENSXMAG00000011590 Xiphophorus maculatus ENSXMAG00000011590 I
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I
ENSXMAG00000015353 Xiphophorus maculatus ENSXMAG00000015353 I
GA11715 Drosophila pseudoobscura FBgn0071765 I
GF24781 Drosophila ananassae FBgn0101774 I
GF25020 Drosophila ananassae FBgn0102012 I
GG14232 Drosophila erecta FBgn0106493 I
GG15174 Drosophila erecta FBgn0107427 I
GH15771 Drosophila grimshawi FBgn0123242 I
GI12551 Drosophila mojavensis FBgn0135308 I
GI12763 Drosophila mojavensis FBgn0135520 I
GM11368 Drosophila sechellia FBgn0166311 I
GM14024 Drosophila sechellia FBgn0168953 I
GM14603 Drosophila sechellia FBgn0169524 I
GD13304 Drosophila simulans FBgn0185023 I
GD13305 Drosophila simulans FBgn0185024 I
GD13794 Drosophila simulans FBgn0185494 I
GJ16103 Drosophila virilis FBgn0203288 I
GJ16104 Drosophila virilis FBgn0203289 I
GK16692 Drosophila willistoni FBgn0218694 I
GK17507 Drosophila willistoni FBgn0219506 I
GE20660 Drosophila yakuba FBgn0237965 I
GE21392 Drosophila yakuba FBgn0238652 I
HMEL014701 Heliconius melpomene HMEL014701 I
ISCW021315 Ixodes scapularis ISCW021315 I
KGM_21493 Danaus plexippus KGM_21493 I
L798_11766 Zootermopsis nevadensis L798_11766 I
MCINX009924 Melitaea cinxia MCINX009924 I
MCINX009925 Melitaea cinxia MCINX009925 I
MESCA005876 Megaselia scalaris MESCA005876 I
NEMVEDRAFT_v1g108258 Nematostella vectensis NEMVEDRAFT_v1g108258 I
PHUM474050 Pediculus humanus PHUM474050 I
PHUM474180 Pediculus humanus PHUM474180 I
SMAR010760 Strigamia maritima SMAR010760 I
Smp_054430 Schistosoma mansoni Smp_054430 I
SPU_018393 Strongylocentrotus purpuratus SPU_018393 I
tetur08g05890 Tetranychus urticae tetur08g05890 I
TriadG20314 Trichoplax adhaerens TriadG20314 I
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I
Cmyd_10009565 Chelonia mydas Cmyd_10009565 I
Ogr05737 Ophisaurus gracilis Ogr05737 I
Pvit_17685 Pogona vitticeps Pvit_17685 I
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I
Ocbimv22039583m.g Octopus bimaculoides Ocbimv22039583m.g I
Sakowv30035375m.g Saccoglossus kowalevskii Sakowv30035375m.g I
CLEC001353 Cimex lectularius CLEC001353 I
HHAL001092-PA Halyomorpha halys HHAL001092-PA I
HHAL001095-PA Halyomorpha halys HHAL001095-PA I
LCUP005777 Lucilia cuprina LCUP005777 I
LCUP005780 Lucilia cuprina LCUP005780 I
Sjc_0100840 Schistosoma japonicum Sjc_0100840 I
SMU15013927 Schmidtea mediterranea SMU15013927 I
scrt2 Xenopus tropicalis XB-GENE-5995512 I
AATE010651 Anopheles atroparvus AATE010651 I
AATE020159 Anopheles atroparvus AATE020159 I
ACHR010032 Anopheles christyi ACHR010032 I
ACOM031677 Anopheles coluzzii ACOM031677 I
ACOM031685 Anopheles coluzzii ACOM031685 I
ACUA003488 Anopheles culicifacies ACUA003488 I
ACUA020861 Anopheles culicifacies ACUA020861 I
ACUA022497 Anopheles culicifacies ACUA022497 I
AFAF007486 Anopheles farauti AFAF007486 I
AFAF017001 Anopheles farauti AFAF017001 I
AFUN001835 Anopheles funestus AFUN001835 I
AFUN002786 Anopheles funestus AFUN002786 I
AMEC013076 Anopheles melas AMEC013076 I
AMEC015586 Anopheles melas AMEC015586 I
AMEM013788 Anopheles merus AMEM013788 I
AMEM017035 Anopheles merus AMEM017035 I
AQUA003879 Anopheles quadriannulatus AQUA003879 I
ASIS012063 Anopheles sinensis ASIS012063 I
ASIS022059 Anopheles sinensis ASIS022059 I
ASTEI08595 Anopheles stephensi ASTEI08595 I
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I
MDOA001622 Musca domestica MDOA001622 I
MDOA005810 Musca domestica MDOA005810 I
PPAI000594 Phlebotomus papatasi PPAI000594 I
A_07725 Schistosoma haematobium A_07725 I
csin111588 Clonorchis sinensis csin111588 I
D915_06717 Fasciola hepatica D915_06717 I
D917_06340 Trichinella nativa D917_06340 I
D918_03987 Trichuris suis D918_03987 I
DME_0000421901 Dracunculus medinensis DME_0000421901 I
ECPE_0000958201 Echinostoma caproni ECPE_0000958201 I
nRc.2.0.1.g22231 Romanomermis culicivorax nRc.2.0.1.g22231 I
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I
SCUD_0000371801 Schistosoma curassoni SCUD_0000371801 I
SMRZ_0000904801 Schistosoma margrebowiei SMRZ_0000904801 I
SMTD_0000188801 Schistosoma mattheei SMTD_0000188801 I
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I
T265_09545 Opisthorchis viverrini T265_09545 I
TMUE_s0027002700 Trichuris muris TMUE_s0027002700 I
TRE_0000944501 Trichobilharzia regenti TRE_0000944501 I
TTRE_0000441701 Trichuris trichiura TTRE_0000441701 I